RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 DUXAA6NLW8 204 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 ZNF724A8MTY0 619 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 ITM2AO43736 263 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 TYROBPO43914 113 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 KIAA0513O60268 411 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 RAMP1O60894 148 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 STX11O75558 287 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 AK1P00568 194 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 CSTAP01040 98 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 IGHV4-39P01824 125 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 COX5AP20674 150 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 IGHV1-2P23083 117 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 DIO1P49895 249 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 FUT5Q11128 374 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 MERTKQ12866 999 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 CASP8Q14790 479 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 PPA1Q15181 289 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 ARHGAP11BQ3KRB8 267 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 SYT14P1Q58G82 188 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 ABLIM2Q6H8Q1 611 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 HEPHL1Q6MZM0 1159 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 C16orf62Q7Z3J2 963 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 ANKRD46Q86W74 232 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 FAM71CQ8NEG0 241 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 OR4A15Q8NGL6 344 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 GTPBP3Q969Y2 492 aaKnown RBP12.38□□□□□ -0.43
ATG4D-206ENST00000586863 USB1Q9BQ65 265 aaKnown RBP12.38□□□□□ -0.43
ATG4D-206ENST00000586863 OR51I1Q9H343 314 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 ACER3Q9NUN7 267 aa12.38□□□□□ -0.43
ATG4D-206ENST00000586863 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.37□□□□□ -0.439e-7■■■□□ 19.2
ATG4D-206ENST00000586863 SHISA9B4DS77 424 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 RNASET2O00584 256 aaKnown RBP12.37□□□□□ -0.43
ATG4D-206ENST00000586863 SCN2BO60939 215 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 NDUFS7O75251 213 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 CD8AP01732 235 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 THBS1P07996 1170 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 OR12D1P0DN82 309 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 PGM1P36871 562 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 ACVR1BP36896 505 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 PHC1P78364 1004 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 PLAURQ03405 335 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 MAD2L1Q13257 205 aaPredicted RBP12.37□□□□□ -0.43
ATG4D-206ENST00000586863 ETFDHQ16134 617 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 TYW3Q6IPR3 259 aaKnown RBP12.37□□□□□ -0.43
ATG4D-206ENST00000586863 TNFAIP8L2Q6P589 184 aaPredicted RBP12.37□□□□□ -0.43
ATG4D-206ENST00000586863 TMPPEQ6ZT21 453 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 EIF3MQ7L2H7 374 aaKnown RBP12.37□□□□□ -0.43
ATG4D-206ENST00000586863 HDXQ7Z353 690 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 GALNT5Q7Z7M9 940 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 HMGN2P46Q86SG4 172 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 ZNF781Q8N8C0 355 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 OR8J2Q8NGG1 315 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 MIPOL1Q8TD10 442 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 RAB8BQ92930 207 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 ARL8AQ96BM9 186 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 DNAJA3Q96EY1 480 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 TRMT61AQ96FX7 289 aaKnown RBP12.37□□□□□ -0.43
ATG4D-206ENST00000586863 TRAF4Q9BUZ4 470 aaPredicted RBP12.37□□□□□ -0.43
ATG4D-206ENST00000586863 REG4Q9BYZ8 158 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 SLCO5A1Q9H2Y9 848 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 AKTIPQ9H8T0 292 aa12.37□□□□□ -0.43
ATG4D-206ENST00000586863 ARFGEF3Q5TH69 2177 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 YLPM1P49750 1951 aaKnown RBP12.36□□□□□ -0.43
ATG4D-206ENST00000586863 IGKV3D-15A0A087WSY6 115 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 WDR91A4D1P6 747 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 SULT2B1O00204 365 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 CRLF1O75462 422 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 IGHV3-9P01782 118 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 C1QCP02747 245 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 GGT1P19440 569 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 PGCP20142 388 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 IDUAP35475 653 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 CDH11P55287 796 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 DMTNQ08495 405 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 SMU1Q2TAY7 513 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 TIMM23BQ5SRD1 257 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 DNAJC14Q6Y2X3 702 aaPredicted RBP12.36□□□□□ -0.43
ATG4D-206ENST00000586863 FRRS1Q6ZNA5 592 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 DNM1P46Q6ZS02 220 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 NUDCD3Q8IVD9 361 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 ZNF100Q8IYN0 542 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 ZNF433Q8N7K0 673 aaPredicted RBP12.36□□□□□ -0.43
ATG4D-206ENST00000586863 GOLGA6L1Q8N7Z2 621 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 SLC25A43Q8WUT9 341 aaPredicted RBP12.36□□□□□ -0.43
ATG4D-206ENST00000586863 TMEM234Q8WY98 164 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 ZBTB9Q96C00 473 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 ARL5BQ96KC2 179 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 CCDC106Q9BWC9 280 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 C20orf27Q9GZN8 174 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 SSU72Q9NP77 194 aaKnown RBP12.36□□□□□ -0.43
ATG4D-206ENST00000586863 KCNK9Q9NPC2 374 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 CTPS2Q9NRF8 586 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 SERINC1Q9NRX5 453 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 EXD2Q9NVH0 621 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 CISD1Q9NZ45 108 aaKnown RBP12.36□□□□□ -0.43
ATG4D-206ENST00000586863 GDF2Q9UK05 429 aaPredicted RBP12.36□□□□□ -0.43
ATG4D-206ENST00000586863 WDR45Q9Y484 360 aa12.36□□□□□ -0.43
ATG4D-206ENST00000586863 PRAMEF27A3QJZ7 478 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 OR5H1A6NKK0 313 aa12.35□□□□□ -0.43
ATG4D-206ENST00000586863 CLDN24A6NM45 220 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms