RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 SEMA7AO75326 666 aa16.58■□□□□ 0.24
RFFL-211ENST00000584541 TIPRLO75663 272 aa16.58■□□□□ 0.24
RFFL-211ENST00000584541 H1F0P07305 194 aaKnown RBP16.58■□□□□ 0.24
RFFL-211ENST00000584541 MST1P26927 711 aa16.58■□□□□ 0.24
RFFL-211ENST00000584541 TRAM2Q15035 370 aa16.58■□□□□ 0.24
RFFL-211ENST00000584541 IQCCQ4KMZ1 466 aa16.58■□□□□ 0.24
RFFL-211ENST00000584541 RNFT1Q5M7Z0 435 aa16.58■□□□□ 0.24
RFFL-211ENST00000584541 OR2T5Q6IEZ7 315 aa16.58■□□□□ 0.24
RFFL-211ENST00000584541 POMZP3Q6PJE2 187 aa16.58■□□□□ 0.24
RFFL-211ENST00000584541 GDF7Q7Z4P5 450 aa16.58■□□□□ 0.24
RFFL-211ENST00000584541 TSEN54Q7Z6J9 526 aaKnown RBP16.58■□□□□ 0.24
RFFL-211ENST00000584541 LSM14AQ8ND56 463 aaKnown RBP16.58■□□□□ 0.24
RFFL-211ENST00000584541 OR2T29Q8NH02 315 aa16.58■□□□□ 0.24
RFFL-211ENST00000584541 MPP4Q96JB8 637 aa16.58■□□□□ 0.24
RFFL-211ENST00000584541 S100A14Q9HCY8 104 aa16.58■□□□□ 0.24
RFFL-211ENST00000584541 RHCGQ9UBD6 479 aa16.58■□□□□ 0.24
RFFL-211ENST00000584541 TESMINQ9Y4I5 508 aa16.58■□□□□ 0.24
RFFL-211ENST00000584541 ZZEF1O43149 2961 aa16.58■□□□□ 0.24
RFFL-211ENST00000584541 TMED7-TICAM2A0A0A6YYA0 188 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 TRGV5A0A0B4J1U4 118 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 NPIPA5E9PKD4 350 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 FFAR1O14842 300 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 ATXN7O15265 892 aaPredicted RBP16.57■□□□□ 0.24
RFFL-211ENST00000584541 DEAF1O75398 565 aaPredicted RBP16.57■□□□□ 0.24
RFFL-211ENST00000584541 KRT36O76013 467 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 GADD45GO95257 159 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 NTN1O95631 604 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 CELA3AP09093 270 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 FASP25445 335 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 ELK4P28324 431 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 RRM2P31350 389 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 MAP2K6P52564 334 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 SELENBP1Q13228 472 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 TMEM44Q2T9K0 475 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 COLEC12Q5KU26 742 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 ATG4DQ86TL0 474 aaPredicted RBP16.57■□□□□ 0.24
RFFL-211ENST00000584541 CISD2Q8N5K1 135 aaKnown RBP16.57■□□□□ 0.24
RFFL-211ENST00000584541 PIK3C3Q8NEB9 887 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 OR5M1Q8NGP8 315 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 POC1BQ8TC44 478 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 SLC38A4Q969I6 547 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 ZNF524Q96C55 264 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 ANKRD19PQ9H560 264 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 REEP1Q9H902 201 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 NMNAT1Q9HAN9 279 aaPredicted RBP16.57■□□□□ 0.24
RFFL-211ENST00000584541 AGPAT4Q9NRZ5 378 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 OSGIN1Q9UJX0 560 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 NPIPA1Q9UND3 350 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 TMED7Q9Y3B3 224 aa16.57■□□□□ 0.24
RFFL-211ENST00000584541 RRP15Q9Y3B9 282 aaKnown RBP16.57■□□□□ 0.24
RFFL-211ENST00000584541 OR2M5A3KFT3 312 aa16.56■□□□□ 0.24
RFFL-211ENST00000584541 SHISA8B8ZZ34 492 aa16.56■□□□□ 0.24
RFFL-211ENST00000584541 HCN1O60741 890 aa16.56■□□□□ 0.24
RFFL-211ENST00000584541 PRSS23O95084 383 aa16.56■□□□□ 0.24
RFFL-211ENST00000584541 LDLRP01130 860 aa16.56■□□□□ 0.24
RFFL-211ENST00000584541 CHMP24386 653 aa16.56■□□□□ 0.24
RFFL-211ENST00000584541 FKBP2P26885 142 aaKnown RBP16.56■□□□□ 0.24
RFFL-211ENST00000584541 FOXD4Q12950 439 aaPredicted RBP16.56■□□□□ 0.24
RFFL-211ENST00000584541 CMPK2Q5EBM0 449 aa16.56■□□□□ 0.24
RFFL-211ENST00000584541 FGD3Q5JSP0 725 aa16.56■□□□□ 0.24
RFFL-211ENST00000584541 C3orf33Q6P1S2 294 aa16.56■□□□□ 0.24
RFFL-211ENST00000584541 ZNF605Q86T29 641 aa16.56■□□□□ 0.24
RFFL-211ENST00000584541 TSPYL5Q86VY4 417 aaPredicted RBP16.56■□□□□ 0.24
RFFL-211ENST00000584541 HS6ST2Q96MM7 605 aa16.56■□□□□ 0.24
RFFL-211ENST00000584541 TSPAN10Q9H1Z9 355 aaPredicted RBP16.56■□□□□ 0.24
RFFL-211ENST00000584541 SLC6A15Q9H2J7 730 aa16.56■□□□□ 0.24
RFFL-211ENST00000584541 DNAJB9Q9UBS3 223 aa16.56■□□□□ 0.24
RFFL-211ENST00000584541 CHRNA9Q9UGM1 479 aa16.56■□□□□ 0.24
RFFL-211ENST00000584541 DSPP15924 2871 aaKnown RBP16.55■□□□□ 0.24
RFFL-211ENST00000584541 A0A087WUJ7 227 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 A0A1W2PRQ8 180 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 GJE1A6NN92 205 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 TTLL8A6PVC2 850 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 CLOCKO15516 846 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 SUSD5O60279 629 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 ACTL6AO96019 429 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 IGHG3P01860 377 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 CCNA2P20248 432 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 B3GALT5-AS1P59052 145 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 FOXK1P85037 733 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 NFATC3Q12968 1075 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 DGCR6Q14129 220 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 GK3PQ14409 553 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 TTC33Q6PID6 262 aaPredicted RBP16.55■□□□□ 0.24
RFFL-211ENST00000584541 RRM2BQ7LG56 351 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 ADGRG3Q86Y34 549 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 SIAH3Q8IW03 269 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 NEIL3Q8TAT5 605 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 SLC25A43Q8WUT9 341 aaPredicted RBP16.55■□□□□ 0.24
RFFL-211ENST00000584541 DDIT4LQ96D03 193 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 DHRS1Q96LJ7 313 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 NPAS1Q99742 590 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 BDH2Q9BUT1 245 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 TMCC3Q9ULS5 477 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 SLC6A5Q9Y345 797 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 SAMHD1Q9Y3Z3 626 aaKnown RBP16.55■□□□□ 0.24
RFFL-211ENST00000584541 AP4B1Q9Y6B7 739 aa16.55■□□□□ 0.24
RFFL-211ENST00000584541 MPDZO75970 2070 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 H3BML4 177 aa16.54■□□□□ 0.24
RFFL-211ENST00000584541 H3BNX3 289 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms