RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 TRAF3IP2O43734 574 aaPredicted RBP2.29□□□□□ -2.04
COPS3-217ENST00000583160 TGDSO95455 350 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 CD55P08174 381 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 UQCRFS1P1P0C7P4 283 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 UBTFL1P0CB47 393 aaPredicted RBP2.29□□□□□ -2.04
COPS3-217ENST00000583160 IGLL1P15814 213 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 CCNA2P20248 432 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 HTR1EP28566 365 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 NUDT1P36639 197 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 CTRLP40313 264 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 RPL29P47914 159 aaKnown RBP2.29□□□□□ -2.04
COPS3-217ENST00000583160 DHPSP49366 369 aaPredicted RBP2.29□□□□□ -2.04
COPS3-217ENST00000583160 GALK2Q01415 458 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 NME3Q13232 169 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 C16orf72Q14CZ0 275 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 PARP6Q2NL67 630 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 SLX4IPQ5VYV7 408 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 ARMC3Q5W041 872 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 LEG1Q6P5S2 330 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 CCDC36Q8IYA8 594 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 C20orf203Q8NBC4 194 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 OR2AP1Q8NGE2 309 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 RAET1EQ8TD07 263 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 ST7LQ8TDW4 575 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 RDH5Q92781 318 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 ART4Q93070 314 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 CBWD1Q9BRT8 395 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 NDUFAF3Q9BU61 184 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 VCXQ9H320 206 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 HMG20BQ9P0W2 317 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 GHRLQ9UBU3 117 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 FAM153AQ9UHL3 310 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 NCOR1O75376 2440 aa2.29□□□□□ -2.04
COPS3-217ENST00000583160 EYSQ5T1H1 3165 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 PLXNA1Q9UIW2 1896 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 COL11A1P12107 1806 aaPredicted RBP2.28□□□□□ -2.04
COPS3-217ENST00000583160 MACROD2A1Z1Q3 448 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 LRCOL1A6NCL2 159 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 PPIHO43447 177 aaKnown RBP2.28□□□□□ -2.04
COPS3-217ENST00000583160 ICOSLGO75144 302 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 KRTAP5-8O75690 187 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 CNMDO75829 334 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 JCHAINP01591 159 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 CHRNA1P02708 482 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 GNSP15586 552 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 AXLP30530 894 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 ADORA1P30542 326 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 BTDP43251 543 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 TNNT3P45378 269 aaPredicted RBP2.28□□□□□ -2.04
COPS3-217ENST00000583160 STARP49675 285 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 ROR1Q01973 937 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 PLOD1Q02809 727 aaPredicted RBP2.28□□□□□ -2.04
COPS3-217ENST00000583160 SRYQ05066 204 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 TCP10Q12799 353 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 SPP2Q13103 211 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 ZNF154Q13106 437 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 EIF4EBP1Q13541 118 aaPredicted RBP2.28□□□□□ -2.04
COPS3-217ENST00000583160 KARSQ15046 597 aaKnown RBP2.28□□□□□ -2.04
COPS3-217ENST00000583160 UBE2V2Q15819 145 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 CYBRD1Q53TN4 286 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 LIPKQ5VXJ0 399 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 BTNL3Q6UXE8 466 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 GOLGA7Q7Z5G4 137 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 C17orf82Q86X59 251 aaPredicted RBP2.28□□□□□ -2.04
COPS3-217ENST00000583160 TMCO5AQ8N6Q1 288 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 NEIL3Q8TAT5 605 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 PHYHIPQ92561 330 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 RIOK1Q9BRS2 568 aaKnown RBP2.28□□□□□ -2.04
COPS3-217ENST00000583160 FANCFQ9NPI8 374 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 NANSQ9NR45 359 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 MMP26Q9NRE1 261 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 RBM28Q9NW13 759 aaKnown RBP2.28□□□□□ -2.04
COPS3-217ENST00000583160 SCML2Q9UQR0 700 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.28□□□□□ -2.04
COPS3-217ENST00000583160 CDH10Q9Y6N8 788 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 NAV1Q8NEY1 1877 aa2.28□□□□□ -2.04
COPS3-217ENST00000583160 PRUNE2Q8WUY3 3088 aa2.28□□□□□ -2.05
COPS3-217ENST00000583160 CUL9Q8IWT3 2517 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 ZBED9Q6R2W3 1325 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 FAM166BA8MTA8 275 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 TLR4O00206 839 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 IGHV3-48P01763 117 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 SLC35G4P0C7Q5 338 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 CYBAP13498 195 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 NTSP30990 170 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 RPL4P36578 427 aaKnown RBP2.27□□□□□ -2.05
COPS3-217ENST00000583160 PMELP40967 661 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 MAGEA4P43358 317 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 EMDP50402 254 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 SSTP61278 116 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 CCNA1P78396 465 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 ZP4Q12836 540 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 TSTA3Q13630 321 aaPredicted RBP2.27□□□□□ -2.05
COPS3-217ENST00000583160 SMU1Q2TAY7 513 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 ZNF562Q6V9R5 426 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 STAC2Q6ZMT1 411 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 DNM1P46Q6ZS02 220 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 P4HA3Q7Z4N8 544 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 ZNF410Q86VK4 478 aa2.27□□□□□ -2.05
COPS3-217ENST00000583160 SERPINA9Q86WD7 417 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms