RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 ORC6Q9Y5N6 252 aa18.7■□□□□ 0.58
SNX11-209ENST00000581705 CPSF4LA6NMK7 179 aaKnown RBP18.69■□□□□ 0.58
SNX11-209ENST00000581705 ACADSP16219 412 aa18.69■□□□□ 0.58
SNX11-209ENST00000581705 IFNGR2P38484 337 aa18.69■□□□□ 0.58
SNX11-209ENST00000581705 SUMO3P55854 103 aaPredicted RBP18.69■□□□□ 0.58
SNX11-209ENST00000581705 FBXW4P57775 412 aa18.69■□□□□ 0.58
SNX11-209ENST00000581705 COPZ1P61923 177 aa18.69■□□□□ 0.58
SNX11-209ENST00000581705 KDM4DQ6B0I6 523 aa18.69■□□□□ 0.58
SNX11-209ENST00000581705 FCRLBQ6BAA4 426 aa18.69■□□□□ 0.58
SNX11-209ENST00000581705 TBPL2Q6SJ96 375 aa18.69■□□□□ 0.58
SNX11-209ENST00000581705 BEST3Q8N1M1 668 aa18.69■□□□□ 0.58
SNX11-209ENST00000581705 DNAJA4Q8WW22 397 aaPredicted RBP18.69■□□□□ 0.58
SNX11-209ENST00000581705 MPP4Q96JB8 637 aa18.69■□□□□ 0.58
SNX11-209ENST00000581705 ABI3Q9P2A4 366 aa18.69■□□□□ 0.58
SNX11-209ENST00000581705 ENOPH1Q9UHY7 261 aa18.69■□□□□ 0.58
SNX11-209ENST00000581705 ITPR2Q14571 2701 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 A0A0B4J2E0 115 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 A0A1B0GX12 115 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 SH3PXD2BA1X283 911 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 BCAS1O75363 584 aaPredicted RBP18.68■□□□□ 0.58
SNX11-209ENST00000581705 ANGPTL1O95841 491 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 CRYABP02511 175 aaKnown RBP18.68■□□□□ 0.58
SNX11-209ENST00000581705 GKN3PP0CG01 181 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 PRG2P13727 222 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 CDH2P19022 906 aaPredicted RBP18.68■□□□□ 0.58
SNX11-209ENST00000581705 COL8A1P27658 744 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 HTR2AP28223 471 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 SOX3P41225 446 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 PER3P56645 1201 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 C17orf67Q0P5P2 114 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 FGD3Q5JSP0 725 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 GDF7Q7Z4P5 450 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 TSPYL5Q86VY4 417 aaPredicted RBP18.68■□□□□ 0.58
SNX11-209ENST00000581705 OR52J3Q8NH60 311 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 SLC7A13Q8TCU3 470 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 ACOT11Q8WXI4 607 aaPredicted RBP18.68■□□□□ 0.58
SNX11-209ENST00000581705 ARSGQ96EG1 525 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 NODALQ96S42 347 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 C12orf10Q9HB07 376 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 MGAT4BQ9UQ53 548 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 PCDHGB6Q9Y5F9 930 aa18.68■□□□□ 0.58
SNX11-209ENST00000581705 IGLV3-32A0A0A0MS00 114 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 TRBV4-1A0A0J9YWV2 114 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 CHP2O43745 196 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 ADAP00813 363 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 LINGO3P0C6S8 592 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 MSX1P28360 303 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 PPP1R8Q12972 351 aaKnown RBP18.67■□□□□ 0.58
SNX11-209ENST00000581705 TUBA3CQ13748 450 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 ZNF770Q6IQ21 691 aaPredicted RBP18.67■□□□□ 0.58
SNX11-209ENST00000581705 TUBA3EQ6PEY2 450 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 ULK3Q6PHR2 472 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 RNF113BQ8IZP6 322 aaKnown RBP18.67■□□□□ 0.58
SNX11-209ENST00000581705 HS3ST5Q8IZT8 346 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 TMEM156Q8N614 296 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 ATG16L2Q8NAA4 619 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 HS6ST2Q96MM7 605 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 ZNF556Q9HAH1 456 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 KRCC1Q9NPI7 259 aaPredicted RBP18.67■□□□□ 0.58
SNX11-209ENST00000581705 CNIH4Q9P003 139 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 KIF17Q9P2E2 1029 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 RHCGQ9UBD6 479 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 MAGED1Q9Y5V3 778 aaPredicted RBP18.67■□□□□ 0.58
SNX11-209ENST00000581705 CRYBG3Q68DQ2 2970 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 CELSR2Q9HCU4 2923 aa18.67■□□□□ 0.58
SNX11-209ENST00000581705 A0A1B0GUH1 482 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 C7orf72A4D263 438 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 HTR3EA5X5Y0 456 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 ANKRD33BA6NCL7 494 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 H0YAE9 185 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 ADAM10O14672 748 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 OR6B1O95007 311 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 MST1P26927 711 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 RBM34P42696 430 aaKnown RBP18.66■□□□□ 0.58
SNX11-209ENST00000581705 P2RX1P51575 399 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 GAS1P54826 345 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 HOXC5Q00444 222 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 ZNF766Q5HY98 468 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 NHSL2Q5HYW2 709 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 WBP2NLQ6ICG8 309 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 SLC30A6Q6NXT4 461 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 PODNL1Q6PEZ8 512 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 MARCH3Q86UD3 253 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 MDS2Q8NDY4 140 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 OR10G3Q8NGC4 313 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 OR5W2Q8NH69 310 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 DGCR6LQ9BY27 220 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 HPF1Q9NWY4 346 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 SELENONQ9NZV5 590 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 RPS6KB2Q9UBS0 482 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 TMEFF2Q9UIK5 374 aaPredicted RBP18.66■□□□□ 0.58
SNX11-209ENST00000581705 ICAM5Q9UMF0 924 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 CARD8Q9Y2G2 431 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 A0A1B0GWA3 101 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 DLGAP1O14490 977 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 HCRTR2O43614 444 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 MAN1A2O60476 641 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 PGCP20142 388 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 PRKACGP22612 351 aa18.66■□□□□ 0.58
SNX11-209ENST00000581705 CBLP22681 906 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms