RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 OR8H1Q8NGG4 311 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 OR52B4Q8NGK2 314 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 AKR1E2Q96JD6 320 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 VPS35Q96QK1 796 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 NRIP2Q9BQI9 281 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 PELOQ9BRX2 385 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 HDHD3Q9BSH5 251 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 RSPO3Q9BXY4 272 aaPredicted RBP1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 KRTAP4-1Q9BYQ7 146 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 ZNF385DQ9H6B1 395 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 DHX33Q9H6R0 707 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 VAT1LQ9HCJ6 419 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 NUFIP1Q9UHK0 495 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 KIF25Q9UIL4 384 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 TBX21Q9UL17 535 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 ERVW-1Q9UQF0 538 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 GAKO14976 1311 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 MAP3K15Q6ZN16 1313 aa1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 MTCL1Q9Y4B5 1905 aaKnown RBP1.81□□□□□ -2.12
SMCHD1-206ENST00000581631 IGHV3OR16-13A0A075B7E8 117 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 VSTM2BA6NLU5 285 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 C11orf94C9JXX5 98 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 PRKYO43930 277 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 JAK2O60674 1132 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 B3GAT3O94766 335 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 P04436 131 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 ADRB3P13945 408 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 ATP6V1B2P21281 511 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 PRKXP51817 358 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 SELENOTP62341 195 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 TGFBR3Q03167 851 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 SLAQ13239 276 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 CEBPEQ15744 281 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 NRF1Q16656 503 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 RAET1GQ6H3X3 334 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 C6orf89Q6UWU4 347 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 CENPUQ71F23 418 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 C16orf62Q7Z3J2 963 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 RALGPS2Q86X27 583 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 MISPQ8IVT2 679 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 SVOPLQ8N434 492 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 DUSP18Q8NEJ0 188 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 OR56B4Q8NH76 319 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 C14orf79Q96F83 325 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 FOPNLQ96NB1 174 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 VCPKMTQ9H867 229 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 ECT2Q9H8V3 914 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 RBAKQ9NYW8 714 aaPredicted RBP1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 MOSPD1Q9UJG1 213 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 PLEKHH1Q9ULM0 1364 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 SLIT3O75094 1523 aa1.8□□□□□ -2.12
SMCHD1-206ENST00000581631 TRIM64A6NGJ6 449 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 TRIM64BA6NI03 449 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 HCRTR1O43613 425 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 VPS26AO75436 327 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 UFL1O94874 794 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 CRISP2P16562 243 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 CYP2B6P20813 491 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 KLK7P49862 253 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 TAS2R19P59542 299 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 HSF2Q03933 536 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 ARL6IP1Q15041 203 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 PSG5Q15238 335 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 ZNF311Q5JNZ3 666 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 ATL3Q6DD88 541 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 NIPAL3Q6P499 406 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 CCDC137Q6PK04 289 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 DPY19L4Q7Z388 723 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 ABHD12BQ7Z5M8 362 aaPredicted RBP1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 MFSD6LQ8IWD5 586 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 OR5L2Q8NGL0 311 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 FANK1Q8TC84 345 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 PNPT1Q8TCS8 783 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 RAPGEF5Q92565 580 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 RPL3LQ92901 407 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 CEP170P1Q96L14 293 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 SLC6A7Q99884 636 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 SPXQ9BT56 116 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 NAT10Q9H0A0 1025 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 ATXN10Q9UBB4 475 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 B9D1Q9UPM9 204 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 MGAT4BQ9UQ53 548 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 MAD1L1Q9Y6D9 718 aa1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 FBN1P35555 2871 aaKnown RBP1.79□□□□□ -2.12
SMCHD1-206ENST00000581631 IGHV2-70DA0A0C4DH43 119 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 UGT2B17O75795 530 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 PTBP3O95758 552 aaKnown RBP1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 LGI1O95970 557 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 CA1P00915 261 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 MT-ND3P03897 115 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 PLEKP08567 350 aaPredicted RBP1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 CHTF8P0CG12 524 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 ICAM2P13598 275 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 HOXA9P31269 272 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 OTX2P32243 289 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 KIF5BP33176 963 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 ADRA1AP35348 466 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 LEPP41159 167 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 RABIFP47224 123 aa1.78□□□□□ -2.12
SMCHD1-206ENST00000581631 ZNF136P52737 540 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms