RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 SH3BP4Q9P0V3 963 aa11.12□□□□□ -0.63
SS18-219ENST00000581570 UPB1Q9UBR1 384 aa11.12□□□□□ -0.63
SS18-219ENST00000581570 DTNAQ9Y4J8 743 aa11.12□□□□□ -0.63
SS18-219ENST00000581570 PLCE1Q9P212 2302 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 ESPNB1AK53 854 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 B9A039 149 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 PDLIM1O00151 329 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 ZNF264O43296 627 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 AKAP10O43572 662 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 EIF4E2O60573 245 aaKnown RBP11.11□□□□□ -0.63
SS18-219ENST00000581570 SEC22BO75396 215 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 RSL1D1O76021 490 aaKnown RBP11.11□□□□□ -0.63
SS18-219ENST00000581570 SNUPNO95149 360 aaKnown RBP11.11□□□□□ -0.63
SS18-219ENST00000581570 SLU7O95391 586 aaKnown RBP11.11□□□□□ -0.63
SS18-219ENST00000581570 HMGN2P05204 90 aaKnown RBP11.11□□□□□ -0.63
SS18-219ENST00000581570 ATP5F1P24539 256 aaPredicted RBP11.11□□□□□ -0.63
SS18-219ENST00000581570 GIFP27352 417 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 FRKP42685 505 aaPredicted RBP11.11□□□□□ -0.63
SS18-219ENST00000581570 PRKAA2P54646 552 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 DVL1P1P54792 670 aaPredicted RBP11.11□□□□□ -0.63
SS18-219ENST00000581570 CDH15P55291 814 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 PRPS1P60891 318 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 LASP1Q14847 261 aaKnown RBP11.11□□□□□ -0.63
SS18-219ENST00000581570 UGT2A3Q6UWM9 527 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 TRIM46Q7Z4K8 759 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 SPATA19Q7Z5L4 167 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 C1orf162Q8NEQ5 155 aaPredicted RBP11.11□□□□□ -0.63
SS18-219ENST00000581570 ZHX1-C8orf76Q96EF9 292 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 ZNF764Q96H86 408 aaPredicted RBP11.11□□□□□ -0.63
SS18-219ENST00000581570 SNX18Q96RF0 628 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 PAFAH2Q99487 392 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 REEP4Q9H6H4 257 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 MID1IP1Q9NPA3 183 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 RRAGDQ9NQL2 400 aaPredicted RBP11.11□□□□□ -0.63
SS18-219ENST00000581570 ACSS1Q9NUB1 689 aaPredicted RBP11.11□□□□□ -0.63
SS18-219ENST00000581570 ZCCHC3Q9NUD5 404 aaKnown RBP11.11□□□□□ -0.63
SS18-219ENST00000581570 TMEM216Q9P0N5 145 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 DCTN4Q9UJW0 460 aa11.11□□□□□ -0.63
SS18-219ENST00000581570 MEGF8Q7Z7M0 2845 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 FAM157AC9JC47 383 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 POC1B-GALNT4F8VUJ3 575 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 TBX19O60806 448 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 CYP7B1O75881 506 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 WNT11O96014 354 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 TFPIP10646 304 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 UBL4AP11441 157 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 DAOP14920 347 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 CREB1P16220 341 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 EFNA1P20827 205 aaPredicted RBP11.1□□□□□ -0.63
SS18-219ENST00000581570 IDH3GP51553 393 aaPredicted RBP11.1□□□□□ -0.63
SS18-219ENST00000581570 SESN3P58005 492 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 TGFBR3Q03167 851 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 LGALS3BPQ08380 585 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 MERTKQ12866 999 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 KIAA0040Q15053 153 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 PDLIM3Q53GG5 364 aaPredicted RBP11.1□□□□□ -0.63
SS18-219ENST00000581570 SYT14P1Q58G82 188 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 DCST2Q5T1A1 773 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 C1QTNF12Q5T7M4 302 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 KLHL24Q6TFL4 600 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 CASP12Q6UXS9 341 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 DEF8Q6ZN54 512 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 SLC22A9Q8IVM8 553 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 PIGXQ8TBF5 258 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 ZNF418Q8TF45 676 aaPredicted RBP11.1□□□□□ -0.63
SS18-219ENST00000581570 ST8SIA1Q92185 356 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 FAM120BQ96EK7 910 aaKnown RBP11.1□□□□□ -0.63
SS18-219ENST00000581570 L3HYPDHQ96EM0 354 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 KCNS3Q9BQ31 491 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 THUMPD3Q9BV44 507 aaKnown RBP11.1□□□□□ -0.63
SS18-219ENST00000581570 FUT8Q9BYC5 575 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 CA10Q9NS85 328 aa11.1□□□□□ -0.63
SS18-219ENST00000581570 NPIPB8E9PQR5 432 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 NPIPB9F8W1W9 429 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 CRCPO75575 148 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 OR4A8P0C604 315 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 PPOXP50336 477 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 SLC16A1P53985 500 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 ADIPOQQ15848 244 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 VHLLQ6RSH7 139 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 CCDC103Q8IW40 242 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 CCNYL1Q8N7R7 359 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 ADAMTS15Q8TE58 950 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 FAM216AQ8WUB2 273 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 SLC25A43Q8WUT9 341 aaPredicted RBP11.09□□□□□ -0.63
SS18-219ENST00000581570 DCAKDQ8WVC6 231 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 NEU4Q8WWR8 484 aaPredicted RBP11.09□□□□□ -0.63
SS18-219ENST00000581570 TMEM234Q8WY98 164 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 RNF166Q96A37 237 aaPredicted RBP11.09□□□□□ -0.63
SS18-219ENST00000581570 METTL2AQ96IZ6 378 aaKnown RBP11.09□□□□□ -0.63
SS18-219ENST00000581570 ACTRT3Q9BYD9 372 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 LAT2Q9GZY6 243 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 PLK3Q9H4B4 646 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 GSTO2Q9H4Y5 243 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 SLC7A10Q9NS82 523 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 SIRT3Q9NTG7 399 aaPredicted RBP11.09□□□□□ -0.63
SS18-219ENST00000581570 PARPBPQ9NWS1 579 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 PCDHB14Q9Y5E9 798 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 KCNE3Q9Y6H6 103 aa11.09□□□□□ -0.63
SS18-219ENST00000581570 SERINC4A6NH21 518 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms