RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 AQP1P29972 269 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 RGRP47804 291 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 MAP2K1Q02750 393 aaPredicted RBP3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 ELAVL3Q14576 367 aaKnown RBP3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 SLC25A52Q3SY17 297 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 CFAP221Q4G0U5 840 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 TPGS2Q68CL5 300 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 SYT10Q6XYQ8 523 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 CCDC80Q76M96 950 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 VSTM4Q8IW00 320 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 SKA3Q8IX90 412 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 TBC1D21Q8IYX1 336 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 C14orf178Q8N769 122 aaPredicted RBP3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 STEAP2Q8NFT2 490 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 OR4D9Q8NGE8 314 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 ANKRD49Q8WVL7 239 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 RAPGEF5Q92565 580 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 C16orf74Q96GX8 76 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 SLC35A5Q9BS91 424 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 SMYD3Q9H7B4 428 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 SMPD3Q9NY59 655 aaPredicted RBP3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 TBK1Q9UHD2 729 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 RASD1Q9Y272 281 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 AK6Q9Y3D8 172 aaKnown RBP3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 DDX49Q9Y6V7 483 aaKnown RBP3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 CLSPNQ9HAW4 1339 aa3.34□□□□□ -1.87
SMCHD1-205ENST00000581383 HDAC3O15379 428 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 TAPBPO15533 448 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 ZNF264O43296 627 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 OR10H3O60404 316 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 ECI2O75521 394 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 SPAG6O75602 509 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 ZNF19P17023 458 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 PCMT1P22061 227 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 FGF9P31371 208 aaPredicted RBP3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 GBX2P52951 348 aaPredicted RBP3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 RIPPLY3P57055 190 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 MESDQ14696 234 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 RGS9BPQ6ZS82 235 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 PPP1R27Q86WC6 154 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 SVOPLQ8N434 492 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 OR56B4Q8NH76 319 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 PIGCQ92535 297 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 EMG1Q92979 244 aaKnown RBP3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 TECTBQ96PL2 329 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 TUBGCP2Q9BSJ2 902 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 CRACR2AQ9BSW2 395 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 PIPOXQ9P0Z9 390 aa3.33□□□□□ -1.88
SMCHD1-205ENST00000581383 IGKV6D-21A0A0A0MT36 114 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 A0A1B0GUS0 222 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 TMEM110-MUSTN1A8MSY1 372 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 SNNO75324 88 aaPredicted RBP3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 ZNF44P15621 663 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 CALRP27797 417 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 LEPP41159 167 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 TDO2P48775 406 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 DAP3P51398 398 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 BIDP55957 195 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 UBE2HP62256 183 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 ZNF45Q02386 682 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 CHRNB3Q05901 458 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 EGFEM1PQ0D2K5 195 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 CCDC173Q0VFZ6 552 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 C1orf61Q13536 156 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 GANABQ14697 944 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 ZNF79Q15937 498 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 SPATA46Q5T0L3 261 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 PMF1Q6P1K2 205 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 SCARA5Q6ZMJ2 495 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 ARCQ7LC44 396 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 TMEM110Q86TL2 294 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 TGIF2LYQ8IUE0 185 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 PRR22Q8IZ63 422 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 ALLCQ8N6M5 410 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 FAM133AQ8N9E0 248 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 CATSPER1Q8NEC5 780 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 MAIP1Q8WWC4 291 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 MRPS31Q92665 395 aaKnown RBP3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 GAL3ST1Q99999 423 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 ZNF670Q9BS34 389 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 NIPSNAP3BQ9BS92 247 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 NICN1Q9BSH3 213 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 VCX2Q9H322 139 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 LRRN3Q9H3W5 708 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 POPDC2Q9HBU9 364 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 UFSP2Q9NUQ7 469 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 CD274Q9NZQ7 290 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 PHF11Q9UIL8 331 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 PTCH1Q13635 1447 aa3.32□□□□□ -1.88
SMCHD1-205ENST00000581383 FRMPD3Q5JV73 1810 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 ATAD2BQ9ULI0 1458 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 TTC21BQ7Z4L5 1316 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 CXCL13O43927 109 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 KRTAP1-4P0C5Y4 121 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 IMPDH1P20839 514 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 ANXA13P27216 316 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 GCAP28676 217 aa3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 YWHABP31946 246 aaKnown RBP3.31□□□□□ -1.88
SMCHD1-205ENST00000581383 RDXP35241 583 aaKnown RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms