RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 IL32P24001 234 aa20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 ADSLP30566 484 aaPredicted RBP20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 CHI3L1P36222 383 aaPredicted RBP20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 DIO1P49895 249 aa20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 WDR4P57081 412 aaKnown RBP20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 UFM1P61960 85 aa20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 CSNK2A1P68400 391 aaPredicted RBP20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 LRRC74AQ0VAA2 488 aa20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 RASGEF1BQ0VAM2 473 aa20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 ITGADQ13349 1161 aa20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 HHATQ5VTY9 493 aa20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 ABLIM2Q6H8Q1 611 aa20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 SEZ6L2Q6UXD5 910 aa20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 YTHDF3Q7Z739 585 aaKnown RBP20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 HSD17B8Q92506 261 aa20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 KISS1RQ969F8 398 aaPredicted RBP20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 ZG16BQ96DA0 208 aa20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 PERPQ96FX8 193 aa20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 POTEKPQ9BYX7 375 aa20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 ZNF701Q9NV72 531 aaPredicted RBP20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 THAP1Q9NVV9 213 aa20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 GPR45Q9Y5Y3 372 aa20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 SPIN1Q9Y657 262 aaPredicted RBP20.24■□□□□ 0.83
CDKN2A-212ENST00000578845 IGKV3D-15A0A087WSY6 115 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 FAM171A2A8MVW0 826 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 HDAC3O15379 428 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 CNOT4O95628 575 aaKnown RBP20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 ADAP00813 363 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 C1QCP02747 245 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 PGRP06401 933 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 FKBP2P26885 142 aaKnown RBP20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 IL12AP29459 219 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 PTH2RP49190 550 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 SLC18A1P54219 525 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 KCNJ10P78508 379 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 CHRNEQ04844 493 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 PDK3Q15120 406 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 TSC22D1Q15714 1073 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 TAB1Q15750 504 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 GRINAQ7Z429 371 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 CMIPQ8IY22 773 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 TRIML2Q8N7C3 387 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 Q96MF0 132 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 TRNT1Q96Q11 434 aaKnown RBP20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 CHRNA9Q9UGM1 479 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 LIPT1Q9Y234 373 aa20.23■□□□□ 0.83
CDKN2A-212ENST00000578845 TMEM120BA0PK00 339 aa20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 CCDC154A6NI56 674 aa20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 DNPH1O43598 174 aa20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 FESP07332 822 aa20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 HPCAP84074 193 aa20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 NCMAPQ5T1S8 102 aa20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 RNF130Q86XS8 419 aa20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 ANKRD42Q8N9B4 389 aa20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 GLB1L3Q8NCI6 653 aaPredicted RBP20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 RAB3IL1Q8TBN0 382 aa20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 TMEM171Q8WVE6 324 aa20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 PANX1Q96RD7 426 aa20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 ZNF300Q96RE9 604 aaPredicted RBP20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 PAIP2Q9BPZ3 127 aaKnown RBP20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 SLC38A1Q9H2H9 487 aa20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 NGBQ9NPG2 151 aa20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 CTPS2Q9NRF8 586 aa20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 ABCA2Q9BZC7 2435 aa20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 DNHD1Q96M86 4753 aa20.22■□□□□ 0.83
CDKN2A-212ENST00000578845 AGAP5A6NIR3 686 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 TRPC5OSA6NMA1 111 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 SULT2B1O00204 365 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 ADAM11O75078 769 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 PMS2P2O95744 297 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 HEXAP06865 529 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 COX5AP20674 150 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 EDNRAP25101 427 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 EPHA3P29320 983 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 CLK1P49759 484 aaKnown RBP20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 ANXA11P50995 505 aaKnown RBP20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 NME5P56597 212 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 LTBQ06643 244 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 GPAT3Q53EU6 434 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 CLEC9AQ6UXN8 241 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 LRRC74BQ6ZQY2 392 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 BHLHA15Q7RTS1 189 aaPredicted RBP20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 MTDHQ86UE4 582 aaKnown RBP20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 ARFGAP2Q8N6H7 521 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 ZNF563Q8TA94 476 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 AKAP1Q92667 903 aaKnown RBP eCLIP20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 PMM1Q92871 262 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 MAELQ96JY0 434 aaKnown RBP20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 OR52E6Q96RD3 313 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 BDH2Q9BUT1 245 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 CXorf56Q9H5V9 222 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 WDR55Q9H6Y2 383 aaPredicted RBP20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 PRSS50Q9UI38 385 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 HDGFL3Q9Y3E1 203 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 RNF115Q9Y4L5 304 aa20.21■□□□□ 0.83
CDKN2A-212ENST00000578845 TLN2Q9Y4G6 2542 aa20.2■□□□□ 0.82
CDKN2A-212ENST00000578845 CLDN24A6NM45 220 aa20.2■□□□□ 0.82
CDKN2A-212ENST00000578845 SLCO1B7G3V0H7 640 aa20.2■□□□□ 0.82
CDKN2A-212ENST00000578845 H7C1Q1 480 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms