RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 SF3B4Q15427 424 aaKnown RBP eCLIP10.21□□□□□ -0.771e-53■■■■□ 21.3
CDK5RAP3-210ENST00000578733 ELOA3BQ3SY89 546 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 CMPK2Q5EBM0 449 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 ALG10BQ5I7T1 473 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 PDSS1Q5T2R2 415 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 C3orf33Q6P1S2 294 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 C5orf46Q6UWT4 87 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 ARSKQ6UWY0 536 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 TRILQ7L0X0 811 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 ZDHHC21Q8IVQ6 265 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 MEIOBQ8N635 442 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 ELOA3Q8NG57 546 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 OR10Q1Q8NGQ4 319 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 NEIL3Q8TAT5 605 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 ADAMTS16Q8TE57 1224 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 STMN2Q93045 179 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 DDIT4LQ96D03 193 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 SNRNP40Q96DI7 357 aaKnown RBP10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 MPP4Q96JB8 637 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 FNDC11Q9BVV2 318 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 RSPO3Q9BXY4 272 aaPredicted RBP10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 IL1RAPQ9NPH3 570 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 AP4B1Q9Y6B7 739 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 ENPP4Q9Y6X5 453 aa10.21□□□□□ -0.77
CDK5RAP3-210ENST00000578733 SPENQ96T58 3664 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 TMED7-TICAM2A0A0A6YYA0 188 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 A0A1B0GWA3 101 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 OR14I1A6ND48 311 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 H3BML4 177 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 AQP7O14520 342 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 BCKDKO14874 412 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 ZNF208O43345 1280 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 CHP2O43745 196 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 ZIC3O60481 467 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 FCGR1AP12314 374 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 PRG2P13727 222 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 TNFRSF1BP20333 461 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 TACR3P29371 465 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 CLK1P49759 484 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 DLX5P56178 289 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 ACTR3P61158 418 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 RPS3AP61247 264 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 HOXC5Q00444 222 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 PLAURQ03405 335 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 TOMM34Q15785 309 aaPredicted RBP10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 NHSL2Q5HYW2 709 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 RNFT1Q5M7Z0 435 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 ZFP1Q6P2D0 407 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 POMZP3Q6PJE2 187 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 CHMP1BQ7LBR1 199 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 PIWIL3Q7Z3Z3 882 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 RBM45Q8IUH3 476 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 LACC1Q8IV20 430 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 SIAH3Q8IW03 269 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 PM20D2Q8IYS1 436 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 PIK3C3Q8NEB9 887 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 ABTB1Q969K4 478 aaPredicted RBP10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 C3orf49Q96BT1 292 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 DUS3LQ96G46 650 aaKnown RBP10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 SLC41A3Q96GZ6 507 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 ZNF300Q96RE9 604 aaPredicted RBP10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 EPYCQ99645 322 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 AMBRA1Q9C0C7 1298 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 ADAM19Q9H013 955 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 TSPAN10Q9H1Z9 355 aaPredicted RBP10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 SLC6A15Q9H2J7 730 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 ANKRD19PQ9H560 264 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 KRCC1Q9NPI7 259 aaPredicted RBP10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 ASF1BQ9NVP2 202 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 PAQR5Q9NXK6 330 aaPredicted RBP10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 CHRNA9Q9UGM1 479 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 TMED7Q9Y3B3 224 aa10.2□□□□□ -0.78
CDK5RAP3-210ENST00000578733 A0A0B4J2E0 115 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 A0A1B0GVC2 190 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 A0A1B0GX12 115 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 hCG_2039718K7EN88 272 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 GNGT2O14610 69 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 ADAMDEC1O15204 470 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 SEMG1P04279 462 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 CELA3AP09093 270 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 ABOP16442 354 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 HTR2AP28223 471 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 SLC7A1P30825 629 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 GFRA1P56159 465 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 RAC1P63000 192 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 GK3PQ14409 553 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 TRAM2Q15035 370 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 NPTX1Q15818 432 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 BCL2A1Q16548 175 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 WLSQ5T9L3 541 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 ZNF324BQ6AW86 544 aaPredicted RBP10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 TTC33Q6PID6 262 aaPredicted RBP10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 GFRALQ6UXV0 394 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 RRM2BQ7LG56 351 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 COMTD1Q86VU5 262 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 ADGRG5Q8IZF4 528 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 OFCC1Q8IZS5 231 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 OR4D11Q8NGI4 311 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 CANT1Q8WVQ1 401 aa10.19□□□□□ -0.78
CDK5RAP3-210ENST00000578733 SMPDL3BQ92485 455 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms