RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 CHD8Q9HCK8 2581 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 CACNA1GO43497 2377 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 A0A0G2JMM0 328 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 A0A1W2PPB8 328 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 A0A1W2PRS3 328 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 KIR3DP1A8MWS1 328 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 SMIM18P0DKX4 95 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 ELK4P28324 431 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 IFNA8P32881 189 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 GGT2P36268 569 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 RBM34P42696 430 aaKnown RBP11.93□□□□□ -0.5
CTC1-203ENST00000578240 SLC1A3P43003 542 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 SLC6A8P48029 635 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 CHN2P52757 468 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 CRISP1P54107 249 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 ESRRGP62508 458 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 ALDH6A1Q02252 535 aaKnown RBP11.93□□□□□ -0.5
CTC1-203ENST00000578240 PTGES3Q15185 160 aaKnown RBP11.93□□□□□ -0.5
CTC1-203ENST00000578240 QPRTQ15274 297 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 TBC1D25Q3MII6 688 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 ACER2Q5QJU3 275 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 TMEM236Q5W0B7 351 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 MDGA2Q7Z553 956 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 MISPQ8IVT2 679 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 ZNF555Q8NEP9 628 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 DNAJA4Q8WW22 397 aaPredicted RBP11.93□□□□□ -0.5
CTC1-203ENST00000578240 APH1BQ8WW43 257 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 UBE2FQ969M7 185 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 KIAA1143Q96AT1 154 aaPredicted RBP11.93□□□□□ -0.5
CTC1-203ENST00000578240 NXPE2Q96DL1 559 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 DPH1Q9BZG8 443 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 METTL7AQ9H8H3 244 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 ZNF556Q9HAH1 456 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 PNPLA3Q9NST1 481 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 BOD1L1Q8NFC6 3051 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 EPG5Q9HCE0 2579 aa11.93□□□□□ -0.5
CTC1-203ENST00000578240 ANKUB1A6NFN9 424 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 IFI30P13284 250 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 GABRB1P18505 474 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 ENDOUP21128 410 aaKnown RBP11.92□□□□□ -0.5
CTC1-203ENST00000578240 TACR3P29371 465 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 DLX5P56178 289 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 IL18R1Q13478 541 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 ZNF620Q6ZNG0 422 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 SLC46A3Q7Z3Q1 461 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 ENTHD1Q8IYW4 607 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 RNF113BQ8IZP6 322 aaKnown RBP11.92□□□□□ -0.5
CTC1-203ENST00000578240 C8orf59Q8N0T1 100 aaPredicted RBP11.92□□□□□ -0.5
CTC1-203ENST00000578240 IQCF1Q8N6M8 205 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 FADS6Q8N9I5 356 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 WDSUB1Q8N9V3 476 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 OR2M3Q8NG83 312 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 CNIH3Q8TBE1 160 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 RNF217Q8TC41 542 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 GNPDA2Q8TDQ7 276 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 IP6K3Q96PC2 410 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 CPNE5Q9HCH3 593 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 ANKRD10Q9NXR5 420 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 MED11Q9P086 117 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 OSGIN1Q9UJX0 560 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 GMPPBQ9Y5P6 360 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 ATMQ13315 3056 aa11.92□□□□□ -0.5
CTC1-203ENST00000578240 TRIM64A6NGJ6 449 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 ENO4A6NNW6 628 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 LRRN3E7EW58 273 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 ETV2O00321 342 aaPredicted RBP11.91□□□□□ -0.5
CTC1-203ENST00000578240 NKX2-8O15522 239 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 WBP4O75554 376 aaKnown RBP11.91□□□□□ -0.5
CTC1-203ENST00000578240 PRKCAP17252 672 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 PGCP20142 388 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 SUMO3P55854 103 aaPredicted RBP11.91□□□□□ -0.5
CTC1-203ENST00000578240 COPZ1P61923 177 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 C17orf67Q0P5P2 114 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 AIMP2Q13155 320 aaKnown RBP11.91□□□□□ -0.5
CTC1-203ENST00000578240 CBFBQ13951 182 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 MAD2L1BPQ15013 274 aaPredicted RBP11.91□□□□□ -0.5
CTC1-203ENST00000578240 MEP1AQ16819 746 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 C12orf73Q69YU5 71 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 KRT80Q6KB66 452 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 JMJD6Q6NYC1 403 aaPredicted RBP11.91□□□□□ -0.5
CTC1-203ENST00000578240 ARSKQ6UWY0 536 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 RASSF6Q6ZTQ3 369 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 TMPRSS11FQ6ZWK6 438 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 THAP5Q7Z6K1 395 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 CCDC103Q8IW40 242 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 OR13C2Q8NGS9 318 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 BPIFA2Q96DR5 249 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 SECISBP2Q96T21 854 aaKnown RBP11.91□□□□□ -0.5
CTC1-203ENST00000578240 ANGPTL4Q9BY76 406 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 ZNF696Q9H7X3 374 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 ZNF226Q9NYT6 803 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 TAS2R10Q9NYW0 307 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 PPP4R1LQ9P1A2 415 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 RPS6KB2Q9UBS0 482 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 FBXL2Q9UKC9 423 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 RNF6Q9Y252 685 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 MED31Q9Y3C7 131 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 TP53I11O14683 189 aa11.91□□□□□ -0.5
CTC1-203ENST00000578240 CDC40O60508 579 aaKnown RBP eCLIP11.91□□□□□ -0.5
CTC1-203ENST00000578240 GSTM3P21266 225 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms