RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 TRMOQ9BU70 441 aa10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 QRSL1Q9H0R6 528 aaKnown RBP10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 TNFRSF12AQ9NP84 129 aa10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 PSMC3IPQ9P2W1 217 aaPredicted RBP10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 MALT1Q9UDY8 824 aa10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 EMCNQ9ULC0 261 aa10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 TRAF6Q9Y4K3 522 aa10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 PTGDR2Q9Y5Y4 395 aa10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 SPIN1Q9Y657 262 aaPredicted RBP10.23□□□□□ -0.77
CTDNEP1-212ENST00000576613 MALRD1Q5VYJ5 2156 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 A0A1W2PR80 420 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 ZNF716A6NP11 495 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 NPIPB9F8W1W9 429 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 SCAMP2O15127 329 aaKnown RBP10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 KIAA0513O60268 411 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 MRPL33O75394 65 aaKnown RBP10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 CYP7B1O75881 506 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 LY6HO94772 140 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 PGRP06401 933 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 TFPIP10646 304 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 PGCP20142 388 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 ECHS1P30084 290 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 NR4A2P43354 598 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 SESN3P58005 492 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 PHC1P78364 1004 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 MERTKQ12866 999 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 SKP2Q13309 424 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 GABRA6Q16445 453 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 CCDC153Q494R4 210 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 GALNTL6Q49A17 601 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 PDZK1Q5T2W1 519 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 C1QTNF12Q5T7M4 302 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 TRMT10CQ7L0Y3 403 aaKnown RBP10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 C17orf78Q8N4C9 275 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 NATD1Q8N6N6 113 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 OR2T11Q8NH01 316 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 PSMA8Q8TAA3 256 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 PIGXQ8TBF5 258 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 OR5P2Q8WZ92 322 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 C3orf49Q96BT1 292 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 MOAP1Q96BY2 351 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 MSI2Q96DH6 328 aaKnown RBP10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 MUS81Q96NY9 551 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 THUMPD3Q9BV44 507 aaKnown RBP10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 NMUR2Q9GZQ4 415 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 MYOZ1Q9NP98 299 aaPredicted RBP10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 ATAD3AQ9NVI7 634 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 GPATCH2Q9NW75 528 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 ATP6V1HQ9UI12 483 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 AMDHD2Q9Y303 409 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 FIS1Q9Y3D6 152 aa10.22□□□□□ -0.77
CTDNEP1-212ENST00000576613 LOC390937A0A1W2PQ73 354 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 SLC35F4A4IF30 521 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 SERINC4A6NH21 518 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 ESPNB1AK53 854 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 VWC2LB2RUY7 222 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 AZIN1O14977 448 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 LSM1O15116 133 aaKnown RBP10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 DNPH1O43598 174 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 CSTAP01040 98 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 PROCP04070 461 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 LINC00032P0C843 101 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 BCKDHAP12694 445 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 FKBP2P26885 142 aaKnown RBP10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 MAPK1P28482 360 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 SLC16A1P53985 500 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 SNRPD2P62316 118 aaKnown RBP10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 TGFBR3Q03167 851 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 WHAMMP3Q1A5X7 153 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 LSM12Q3MHD2 195 aaKnown RBP10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 LIPMQ5VYY2 423 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 BHLHB9Q6PI77 547 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 CCDC63Q8NA47 563 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 ZNF540Q8NDQ6 660 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 C1orf162Q8NEQ5 155 aaPredicted RBP10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 SFXN5Q8TD22 340 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 ZNF524Q96C55 264 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 OR7D2Q96RA2 312 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 PRR14Q9BWN1 585 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 C1QTNF6Q9BXI9 259 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 LAT2Q9GZY6 243 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 EML4Q9HC35 981 aaKnown RBP10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 OXSMQ9NWU1 459 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 TBK1Q9UHD2 729 aa10.21□□□□□ -0.77
CTDNEP1-212ENST00000576613 HEATR1Q9H583 2144 aaKnown RBP10.21□□□□□ -0.78
CTDNEP1-212ENST00000576613 DUXAA6NLW8 204 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 ANKRD28O15084 1053 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 RIPK2O43353 540 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 TCF21O43680 179 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 DNAJA2O60884 412 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 STX11O75558 287 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 PMS2P2O95744 297 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 AK1P00568 194 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 TGFAP01135 160 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 ITGA5P08648 1049 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 UBTFL6P0CB48 400 aaPredicted RBP10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 CPA3P15088 417 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 APOBEC1P41238 236 aaKnown RBP10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 MAGEA8P43361 318 aa10.2□□□□□ -0.78
CTDNEP1-212ENST00000576613 CCT5P48643 541 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms