RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 TMEM229AB2RXF0 380 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 SEC14L5O43304 696 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 WDR1O75083 606 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 WISP1O95388 367 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 PLA2G2AP14555 144 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 GABRA1P14867 456 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 TNFRSF1BP20333 461 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 IL11P20809 199 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 HTR2AP28223 471 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 OR1E2P47887 323 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 CLDN18P56856 261 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 SRYQ05066 204 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 SF3B4Q15427 424 aaKnown RBP eCLIP12.61□□□□□ -0.39
RPAIN-217ENST00000575711 NPTX1Q15818 432 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 C3AR1Q16581 482 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 EIF2S3LQ2VIR3 472 aaKnown RBP12.61□□□□□ -0.39
RPAIN-217ENST00000575711 MTX3Q5HYI7 312 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 ZNF585AQ6P3V2 769 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 CHMP1BQ7LBR1 199 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 VTCN1Q7Z7D3 282 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 RBM45Q8IUH3 476 aaKnown RBP12.61□□□□□ -0.39
RPAIN-217ENST00000575711 ULK2Q8IYT8 1036 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 UBQLNLQ8IYU4 475 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 ATP6V1C2Q8NEY4 427 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 OR4D11Q8NGI4 311 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 PRR7Q8TB68 274 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 SLC25A43Q8WUT9 341 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-217ENST00000575711 DNAJA4Q8WW22 397 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-217ENST00000575711 CADM1Q9BY67 442 aaKnown RBP12.61□□□□□ -0.39
RPAIN-217ENST00000575711 ADAM19Q9H013 955 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 TP63Q9H3D4 680 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-217ENST00000575711 MMADHCQ9H3L0 296 aaPredicted RBP12.61□□□□□ -0.39
RPAIN-217ENST00000575711 SELENONQ9NZV5 590 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 CHRNA9Q9UGM1 479 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 SH3BGRL2Q9UJC5 107 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 TINAGQ9UJW2 476 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 OSGIN1Q9UJX0 560 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 TMED7Q9Y3B3 224 aa12.61□□□□□ -0.39
RPAIN-217ENST00000575711 A0A1B0GWA3 101 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 AHRRA9YTQ3 701 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 J3QKU1 62 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 EIF1AYO14602 144 aaKnown RBP12.6□□□□□ -0.39
RPAIN-217ENST00000575711 TPST2O60704 377 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 IFNW1P05000 195 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 STSP08842 583 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 CXCR1P25024 350 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 FKBP2P26885 142 aaKnown RBP12.6□□□□□ -0.39
RPAIN-217ENST00000575711 SFTPDP35247 375 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 PTGER4P35408 488 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 CA7P43166 264 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 MAP2K6P52564 334 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 CLDN20P56880 219 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 RPS3AP61247 264 aaKnown RBP12.6□□□□□ -0.39
RPAIN-217ENST00000575711 KCNC4Q03721 635 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 TRAP1Q12931 704 aaKnown RBP12.6□□□□□ -0.39
RPAIN-217ENST00000575711 OR1Q1Q15612 314 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 ALG10BQ5I7T1 473 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 ENTPD8Q5MY95 495 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 PDSS1Q5T2R2 415 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 LCN8Q6JVE9 175 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 PGM2L1Q6PCE3 622 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 ULK3Q6PHR2 472 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 CYP2R1Q6VVX0 501 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 DEF8Q6ZN54 512 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 ESPNLQ6ZVH7 1005 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 ADGRG3Q86Y34 549 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 DOLPP1Q86YN1 238 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 RNF217Q8TC41 542 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 C3orf49Q96BT1 292 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 LRGUKQ96M69 825 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 KLHL15Q96M94 604 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 PRR14Q9BWN1 585 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 TRIM15Q9C019 465 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 C12orf10Q9HB07 376 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 V9GYQ6 96 aa12.6□□□□□ -0.39
RPAIN-217ENST00000575711 ELOA3DA6NLF2 546 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-217ENST00000575711 CPSF4LA6NMK7 179 aaKnown RBP12.59□□□□□ -0.39
RPAIN-217ENST00000575711 PYCARD-AS1I3L0S3 204 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 ZNF208O43345 1280 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 EFNA2O43921 213 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 PRKD3O94806 890 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 OPN1LWP04000 364 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 HOXD4P09016 255 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-217ENST00000575711 TFPIP10646 304 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 PNMTP11086 282 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 CCNA2P20248 432 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 ATP6V1B2P21281 511 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 ACVR2AP27037 513 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 SLC7A1P30825 629 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 SUCLG1P53597 346 aaKnown RBP12.59□□□□□ -0.39
RPAIN-217ENST00000575711 TAS2R41P59536 307 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 MS4A2Q01362 244 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 ELOA3BQ3SY89 546 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 TMEM176BQ3YBM2 270 aaPredicted RBP12.59□□□□□ -0.39
RPAIN-217ENST00000575711 SYT14P1Q58G82 188 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 EMC4Q5J8M3 183 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 C1orf185Q5T7R7 199 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 C1QL3Q5VWW1 255 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 ZNF613Q6PF04 617 aa12.59□□□□□ -0.39
RPAIN-217ENST00000575711 ATG4DQ86TL0 474 aaPredicted RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms