RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 MOV10Q9HCE1 1003 aaKnown RBP7.88□□□□□ -1.15
SMG6-218ENST00000575454 SLC17A5Q9NRA2 495 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 ZCCHC3Q9NUD5 404 aaKnown RBP7.88□□□□□ -1.15
SMG6-218ENST00000575454 UPB1Q9UBR1 384 aa7.88□□□□□ -1.15
SMG6-218ENST00000575454 FAF1Q9UNN5 650 aaPredicted RBP7.88□□□□□ -1.15
SMG6-218ENST00000575454 NPIPA5A0A0B4J1W7 369 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 A0A1W2PR80 420 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 NPIPA7E9PJI5 369 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 NPIPB8E9PQR5 432 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 POC1B-GALNT4F8VUJ3 575 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 OIP5O43482 229 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 EIF1BO60739 113 aaKnown RBP7.87□□□□□ -1.15
SMG6-218ENST00000575454 PDE5AO76074 875 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 H6PDO95479 791 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 NPIPA8P0DM63 369 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 UROSP10746 265 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 PGCP20142 388 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 PRPH2P23942 346 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 GIFP27352 417 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 APEX1P27695 318 aaKnown RBP7.87□□□□□ -1.15
SMG6-218ENST00000575454 RPL3P39023 403 aaKnown RBP7.87□□□□□ -1.15
SMG6-218ENST00000575454 APOBEC1P41238 236 aaKnown RBP7.87□□□□□ -1.15
SMG6-218ENST00000575454 MAGEA8P43361 318 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 ASMTP46597 345 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 PPOXP50336 477 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 CCR4P51679 360 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 SLC16A1P53985 500 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 C2orf54Q08AI8 447 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 MERTKQ12866 999 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 TP53BP2Q13625 1128 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 PDE7AQ13946 482 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 LASP1Q14847 261 aaKnown RBP7.87□□□□□ -1.15
SMG6-218ENST00000575454 KIAA0040Q15053 153 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 SYT14P1Q58G82 188 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 DCST2Q5T1A1 773 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 FAM219BQ5XKK7 198 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 ANKRD26P1Q6NSI1 321 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 CDC73Q6P1J9 531 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 TEX29Q8N6K0 151 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 NATD1Q8N6N6 113 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 CCNYL1Q8N7R7 359 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.87□□□□□ -1.15
SMG6-218ENST00000575454 ZNF614Q8N883 585 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 WDR31Q8NA23 367 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 OR56A1Q8NGH5 318 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 RFWD2Q8NHY2 731 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 NEU4Q8WWR8 484 aaPredicted RBP7.87□□□□□ -1.15
SMG6-218ENST00000575454 CDS1Q92903 461 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 GCDHQ92947 438 aaPredicted RBP7.87□□□□□ -1.15
SMG6-218ENST00000575454 FAM120BQ96EK7 910 aaKnown RBP7.87□□□□□ -1.15
SMG6-218ENST00000575454 EGLN2Q96KS0 407 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 ACTRT3Q9BYD9 372 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 BPESC1Q9GZL8 116 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 LAT2Q9GZY6 243 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 OBP2BQ9NPH6 170 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 ZDHHC18Q9NUE0 388 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 ACER3Q9NUN7 267 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 C1orf109Q9NX04 203 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 TMEM216Q9P0N5 145 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 TMED5Q9Y3A6 229 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 HDGFL3Q9Y3E1 203 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 TRAF6Q9Y4K3 522 aa7.87□□□□□ -1.15
SMG6-218ENST00000575454 A0A087WUV0 522 aaPredicted RBP7.86□□□□□ -1.15
SMG6-218ENST00000575454 SERINC4A6NH21 518 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 ZNF716A6NP11 495 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 ATP6V1G2-DDX39BF2Z307 99 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 NPIPB9F8W1W9 429 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 PDLIM1O00151 329 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 AKAP10O43572 662 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 DNAJA2O60884 412 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 STAMBPO95630 424 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 PMS2P2O95744 297 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 CRYAAP02489 173 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 ITGA5P08648 1049 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 TACSTD2P09758 323 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 TFPIP10646 304 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 NEFHP12036 1026 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 MPGP29372 298 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 SLC1A3P43003 542 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 IDH3GP51553 393 aaPredicted RBP7.86□□□□□ -1.15
SMG6-218ENST00000575454 DVL1P1P54792 670 aaPredicted RBP7.86□□□□□ -1.15
SMG6-218ENST00000575454 FOXA1P55317 472 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 SESN3P58005 492 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 ACTG1P63261 375 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 EFNB3Q15768 340 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 ZSWIM7Q19AV6 140 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 FAM174BQ3ZCQ3 159 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 SPDYE7PQ495Y7 208 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 CFAP157Q5JU67 520 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.86□□□□□ -1.15
SMG6-218ENST00000575454 DEF8Q6ZN54 512 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 EIF3MQ7L2H7 374 aaKnown RBP7.86□□□□□ -1.15
SMG6-218ENST00000575454 SPATA19Q7Z5L4 167 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 ABHD12BQ7Z5M8 362 aaPredicted RBP7.86□□□□□ -1.15
SMG6-218ENST00000575454 ZNF418Q8TF45 676 aaPredicted RBP7.86□□□□□ -1.15
SMG6-218ENST00000575454 OIT3Q8WWZ8 545 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 MOAP1Q96BY2 351 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 OTUB1Q96FW1 271 aaPredicted RBP7.86□□□□□ -1.15
SMG6-218ENST00000575454 BOD1Q96IK1 185 aa7.86□□□□□ -1.15
SMG6-218ENST00000575454 KATNB1Q9BVA0 655 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms