RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 ULK3Q6PHR2 472 aa15.44■□□□□ 0.06
NUP88-210ENST00000574867 OR5M1Q8NGP8 315 aa15.44■□□□□ 0.06
NUP88-210ENST00000574867 SLC25A43Q8WUT9 341 aaPredicted RBP15.44■□□□□ 0.06
NUP88-210ENST00000574867 SLC47A1Q96FL8 570 aa15.44■□□□□ 0.06
NUP88-210ENST00000574867 AMBRA1Q9C0C7 1298 aa15.44■□□□□ 0.06
NUP88-210ENST00000574867 ZNF337Q9Y3M9 751 aa15.44■□□□□ 0.06
NUP88-210ENST00000574867 A0A1B0GWA3 101 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 CPSF4LA6NMK7 179 aaKnown RBP15.43■□□□□ 0.06
NUP88-210ENST00000574867 GJE1A6NN92 205 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 H3BML4 177 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 BCKDKO14874 412 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 UMPSP11172 480 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 PEPDP12955 493 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 ITGA2P17301 1181 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 FKBP2P26885 142 aaKnown RBP15.43■□□□□ 0.06
NUP88-210ENST00000574867 IFNA8P32881 189 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 RAC1P63000 192 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 TLE1Q04724 770 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 BCL2A1Q16548 175 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 FAM98BQ52LJ0 330 aaKnown RBP15.43■□□□□ 0.06
NUP88-210ENST00000574867 ALG10BQ5I7T1 473 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 CYP4Z1Q86W10 505 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 ADAMTS16Q8TE57 1224 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 PRRC1Q96M27 445 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 CTPS2Q9NRF8 586 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 CHRNA9Q9UGM1 479 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 OSGIN1Q9UJX0 560 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 ENPP4Q9Y6X5 453 aa15.43■□□□□ 0.06
NUP88-210ENST00000574867 TRAPPC13A5PLN9 417 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 OR5F1O95221 314 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 GPIP06744 558 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 PNMTP11086 282 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 PTGS2P35354 604 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 TAS2R41P59536 307 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 SPATA24Q86W54 205 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 MIB2Q96AX9 1013 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 DNAJC13O75165 2243 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 TMED7-TICAM2A0A0A6YYA0 188 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 TCRBV3S1A0A5B6 114 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 DHRS12A0PJE2 317 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 THRBP10828 461 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 CXCR1P25024 350 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 LHX2P50458 406 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 CHRNB3Q05901 458 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 ATG4DQ86TL0 474 aaPredicted RBP15.42■□□□□ 0.06
NUP88-210ENST00000574867 CHERPQ8IWX8 916 aaKnown RBP15.42■□□□□ 0.06
NUP88-210ENST00000574867 PM20D2Q8IYS1 436 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 C7orf34Q96L11 122 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 TIMP4Q99727 224 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 PRR14Q9BWN1 585 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 IL1RAPQ9NPH3 570 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 TMED7Q9Y3B3 224 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 SVILO95425 2214 aa15.42■□□□□ 0.06
NUP88-210ENST00000574867 ERICH4A6NGS2 130 aa15.41■□□□□ 0.06
NUP88-210ENST00000574867 ZNF208O43345 1280 aa15.41■□□□□ 0.06
NUP88-210ENST00000574867 CHP2O43745 196 aa15.41■□□□□ 0.06
NUP88-210ENST00000574867 FABP3P05413 133 aa15.41■□□□□ 0.06
NUP88-210ENST00000574867 NQO1P15559 274 aaKnown RBP15.41■□□□□ 0.06
NUP88-210ENST00000574867 ABOP16442 354 aa15.41■□□□□ 0.06
NUP88-210ENST00000574867 ZNF708P17019 499 aa15.41■□□□□ 0.06
NUP88-210ENST00000574867 VLDLRP98155 873 aa15.41■□□□□ 0.06
NUP88-210ENST00000574867 DCST1Q5T197 706 aa15.41■□□□□ 0.06
NUP88-210ENST00000574867 WLSQ5T9L3 541 aa15.41■□□□□ 0.06
NUP88-210ENST00000574867 POMZP3Q6PJE2 187 aa15.41■□□□□ 0.06
NUP88-210ENST00000574867 ADGRG3Q86Y34 549 aa15.41■□□□□ 0.06
NUP88-210ENST00000574867 LILRA2Q8N149 483 aa15.41■□□□□ 0.06
NUP88-210ENST00000574867 GALNT11Q8NCW6 608 aa15.41■□□□□ 0.06
NUP88-210ENST00000574867 SLC38A4Q969I6 547 aa15.41■□□□□ 0.06
NUP88-210ENST00000574867 SEPHS2Q99611 448 aa15.41■□□□□ 0.06
NUP88-210ENST00000574867 PRDM14Q9GZV8 571 aa15.41■□□□□ 0.06
NUP88-210ENST00000574867 NDUFAF4Q9P032 175 aa15.41■□□□□ 0.06
NUP88-210ENST00000574867 ACAD8Q9UKU7 415 aa15.41■□□□□ 0.06
NUP88-210ENST00000574867 FAM32AQ9Y421 112 aaKnown RBP15.41■□□□□ 0.06
NUP88-210ENST00000574867 PRRC2CQ9Y520 2896 aaKnown RBP15.41■□□□□ 0.06
NUP88-210ENST00000574867 ELOA3DA6NLF2 546 aaPredicted RBP15.4■□□□□ 0.06
NUP88-210ENST00000574867 NPIPA2E9PIF3 369 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 NPIPA3F8WFD2 350 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 SEMA7AO75326 666 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 WISP1O95388 367 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 RAP2AP10114 183 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 CPN1P15169 458 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 IL11P20809 199 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 MAGEA2P43356 314 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 CDH12P55289 794 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 CLDN18P56856 261 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 C19orf57Q0VDD7 668 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 ELOA3BQ3SY89 546 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 FGD2Q7Z6J4 655 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 ADGRG5Q8IZF4 528 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 OFCC1Q8IZS5 231 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 MEIOBQ8N635 442 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 ELOA3Q8NG57 546 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 SLC41A3Q96GZ6 507 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 RSRC1Q96IZ7 334 aaKnown RBP15.4■□□□□ 0.06
NUP88-210ENST00000574867 MPP4Q96JB8 637 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 ZNF300Q96RE9 604 aaPredicted RBP15.4■□□□□ 0.06
NUP88-210ENST00000574867 RALYQ9UKM9 306 aaKnown RBP15.4■□□□□ 0.06
NUP88-210ENST00000574867 A4GNTQ9UNA3 340 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 CFAP46Q8IYW2 2715 aa15.4■□□□□ 0.06
NUP88-210ENST00000574867 hCG_2039718K7EN88 272 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms