RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 POMZP3Q6PJE2 187 aa21.83■■□□□ 1.09
ATPAF1-213ENST00000574428 ATG4DQ86TL0 474 aaPredicted RBP21.83■■□□□ 1.09
ATPAF1-213ENST00000574428 SULF2Q8IWU5 870 aa21.83■■□□□ 1.09
ATPAF1-213ENST00000574428 OR2M7Q8NG81 312 aa21.83■■□□□ 1.09
ATPAF1-213ENST00000574428 SLC39A7Q92504 469 aa21.83■■□□□ 1.09
ATPAF1-213ENST00000574428 FAM173AQ9BQD7 235 aa21.83■■□□□ 1.09
ATPAF1-213ENST00000574428 ADAM19Q9H013 955 aa21.83■■□□□ 1.09
ATPAF1-213ENST00000574428 PTGES2Q9H7Z7 377 aa21.83■■□□□ 1.09
ATPAF1-213ENST00000574428 RAB26Q9ULW5 256 aa21.83■■□□□ 1.09
ATPAF1-213ENST00000574428 ANKRD11Q6UB99 2663 aaPredicted RBP21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 EIF4E1BA6NMX2 242 aaKnown RBP21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 PIP5K1CO60331 668 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 PRKCAP17252 672 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 CXADRP78310 365 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 PPP2R2BQ00005 443 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 MED21Q13503 144 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 ZNF770Q6IQ21 691 aaPredicted RBP21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 MEX3DQ86XN8 651 aaKnown RBP21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 P3H2Q8IVL5 708 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 ATG16L2Q8NAA4 619 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 AQP11Q8NBQ7 271 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 NR1H4Q96RI1 486 aaPredicted RBP21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 FEVQ99581 238 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 OSBPL10Q9BXB5 764 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 KIF17Q9P2E2 1029 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 AP4B1Q9Y6B7 739 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 CHD8Q9HCK8 2581 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 CNTRLQ7Z7A1 2325 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 C7orf72A4D263 438 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 ELOA3DA6NLF2 546 aaPredicted RBP21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 SHISA8B8ZZ34 492 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 KPNA4O00629 521 aaPredicted RBP21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 CD97P48960 835 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 UGT2B15P54855 530 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 TBR1Q16650 682 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 PLPPR5Q32ZL2 321 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 ELOA3BQ3SY89 546 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 LINC00114Q6XXX2 140 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 GALNTL5Q7Z4T8 443 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 ELOA3Q8NG57 546 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 TMEM239Q8WW34 195 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 TMEM234Q8WY98 164 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 ST8SIA1Q92185 356 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 MPP4Q96JB8 637 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 RBM4BQ9BQ04 359 aaKnown RBP21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 RBM4Q9BWF3 364 aaKnown RBP21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 OSGIN1Q9UJX0 560 aa21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 KLF13Q9Y2Y9 288 aaPredicted RBP21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 PCDHGA9Q9Y5G4 932 aaKnown RBP21.82■■□□□ 1.08
ATPAF1-213ENST00000574428 DENRO43583 198 aaKnown RBP21.81■■□□□ 1.08
ATPAF1-213ENST00000574428 ALPLP05186 524 aa21.81■■□□□ 1.08
ATPAF1-213ENST00000574428 CCNA2P20248 432 aa21.81■■□□□ 1.08
ATPAF1-213ENST00000574428 DAPP51397 102 aa21.81■■□□□ 1.08
ATPAF1-213ENST00000574428 ALDH3A2P51648 485 aa21.81■■□□□ 1.08
ATPAF1-213ENST00000574428 FOXO1Q12778 655 aa21.81■■□□□ 1.08
ATPAF1-213ENST00000574428 MERTKQ12866 999 aa21.81■■□□□ 1.08
ATPAF1-213ENST00000574428 FOXF1Q12946 379 aa21.81■■□□□ 1.08
ATPAF1-213ENST00000574428 ZNF766Q5HY98 468 aa21.81■■□□□ 1.08
ATPAF1-213ENST00000574428 PGBD2Q6P3X8 592 aa21.81■■□□□ 1.08
ATPAF1-213ENST00000574428 FAHD1Q6P587 224 aa21.81■■□□□ 1.08
ATPAF1-213ENST00000574428 MBOAT2Q6ZWT7 520 aa21.81■■□□□ 1.08
ATPAF1-213ENST00000574428 GRINAQ7Z429 371 aa21.81■■□□□ 1.08
ATPAF1-213ENST00000574428 NRMQ8IXM6 262 aa21.81■■□□□ 1.08
ATPAF1-213ENST00000574428 PFN4Q8NHR9 129 aa21.81■■□□□ 1.08
ATPAF1-213ENST00000574428 ZNF426Q9BUY5 554 aa21.81■■□□□ 1.08
ATPAF1-213ENST00000574428 A0A087WUJ7 227 aa21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 TNFSF12-TNFSF13A0A0A6YY99 330 aa21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 ARRDC5A6NEK1 342 aa21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 GASTP01350 101 aa21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 RFPL3SP0C7P2 107 aa21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 PNMTP11086 282 aa21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 POU2F1P14859 743 aa21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 RFC3P40938 356 aa21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 POLR2HP52434 150 aaKnown RBP21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 C6orf52Q5T4I8 152 aa21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 RRM2BQ7LG56 351 aa21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 PACRGLQ8N7B6 248 aa21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 EXTL1Q92935 676 aa21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 GTPBP3Q969Y2 492 aaKnown RBP21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 SCMH1Q96GD3 660 aa21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 PSD2Q9BQI7 771 aa21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 Q9H521 79 aa21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 ZFP64Q9NPA5 681 aa21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 BOKQ9UMX3 212 aaPredicted RBP21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 MGAQ8IWI9 3026 aa21.8■■□□□ 1.08
ATPAF1-213ENST00000574428 FAM47E-STBD1D6RA91 191 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 CBR3O75828 277 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 CBLP22681 906 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 DPP4P27487 766 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 FOXK1P85037 733 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 OR5M1Q8NGP8 315 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 NIPSNAP1Q9BPW8 284 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 USE1Q9NZ43 259 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 TMEFF2Q9UIK5 374 aaPredicted RBP21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 DKKL1Q9UK85 242 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 MITFO75030 526 aaPredicted RBP21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 PDGFAP04085 211 aa21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 RBM34P42696 430 aaKnown RBP21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 GTF2A1P52655 376 aaPredicted RBP21.79■■□□□ 1.08
ATPAF1-213ENST00000574428 DSCR4P56555 118 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms