RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 ZG16BQ96DA0 208 aa8.91□□□□□ -0.98
RPA1-206ENST00000573994 DNAJA3Q96EY1 480 aa8.91□□□□□ -0.98
RPA1-206ENST00000573994 PIK3IP1Q96FE7 263 aa8.91□□□□□ -0.98
RPA1-206ENST00000573994 MAELQ96JY0 434 aaKnown RBP8.91□□□□□ -0.98
RPA1-206ENST00000573994 MRGPRX4Q96LA9 322 aa8.91□□□□□ -0.98
RPA1-206ENST00000573994 PLEKHF2Q9H8W4 249 aa8.91□□□□□ -0.98
RPA1-206ENST00000573994 TIGARQ9NQ88 270 aa8.91□□□□□ -0.98
RPA1-206ENST00000573994 ZFHX3Q15911 3703 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 DEFB108AA8MXU0 73 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 RFXANKO14593 260 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 UBDO15205 165 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 ATE1O95260 518 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 RAF1P04049 648 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 ENPP1P22413 925 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 PGM1P36871 562 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 SESN3P58005 492 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 KEAP1Q14145 624 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 OXLD1Q5BKU9 147 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 SLC25A53Q5H9E4 307 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 ALKBH2Q6NS38 261 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 C3orf33Q6P1S2 294 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 C22orf34Q6ZV56 151 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 PLEKHM3Q6ZWE6 761 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 FCRLAQ7L513 359 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.9□□□□□ -0.98
RPA1-206ENST00000573994 TUSC5Q8IXB3 177 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 FAM71CQ8NEG0 241 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 ZNF563Q8TA94 476 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 PIWIL2Q8TC59 973 aaKnown RBP8.9□□□□□ -0.98
RPA1-206ENST00000573994 PMM1Q92871 262 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 CPNE4Q96A23 557 aaPredicted RBP8.9□□□□□ -0.98
RPA1-206ENST00000573994 VPS33AQ96AX1 596 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 AURKBQ96GD4 344 aaPredicted RBP8.9□□□□□ -0.98
RPA1-206ENST00000573994 REXO5Q96IC2 774 aaKnown RBP8.9□□□□□ -0.98
RPA1-206ENST00000573994 OR5B2Q96R09 309 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 FOXC2Q99958 501 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 GP6Q9HCN6 339 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 SLCO1B3Q9NPD5 702 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 KLHL13Q9P2N7 655 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 SLC35A3Q9Y2D2 325 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 USH1CQ9Y6N9 552 aa8.9□□□□□ -0.98
RPA1-206ENST00000573994 PCNX3Q9H6A9 2034 aa8.9□□□□□ -0.99
RPA1-206ENST00000573994 NF1P21359 2839 aa8.9□□□□□ -0.99
RPA1-206ENST00000573994 ETV2O00321 342 aaPredicted RBP8.89□□□□□ -0.99
RPA1-206ENST00000573994 AP3D1O14617 1153 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 SMAD9O15198 467 aaKnown RBP8.89□□□□□ -0.99
RPA1-206ENST00000573994 DNAJA2O60884 412 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 ADAM11O75078 769 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 IL6P05231 212 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 FESP07332 822 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 NR2F1P10589 423 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 ETFAP13804 333 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 NID1P14543 1247 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 PGCP20142 388 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 CCNA2P20248 432 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 CRYGSP22914 178 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 FKBP2P26885 142 aaKnown RBP8.89□□□□□ -0.99
RPA1-206ENST00000573994 TSC22D1Q15714 1073 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 GSTA3Q16772 222 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 RPS26P11Q5JNZ5 115 aaPredicted RBP8.89□□□□□ -0.99
RPA1-206ENST00000573994 TMEM201Q5SNT2 666 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 C6orf10Q5SRN2 563 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 TFAP2EQ6VUC0 442 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 STAC2Q6ZMT1 411 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 NUFIP2Q7Z417 695 aaKnown RBP8.89□□□□□ -0.99
RPA1-206ENST00000573994 STK32CQ86UX6 486 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 MIER2Q8N344 545 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 ARFGAP2Q8N6H7 521 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 LRRC8CQ8TDW0 803 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 TMEM234Q8WY98 164 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 ST8SIA1Q92185 356 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 CNOT9Q92600 299 aaKnown RBP8.89□□□□□ -0.99
RPA1-206ENST00000573994 ATP6V1G3Q96LB4 118 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 TRNT1Q96Q11 434 aaKnown RBP8.89□□□□□ -0.99
RPA1-206ENST00000573994 TACO1Q9BSH4 297 aaKnown RBP8.89□□□□□ -0.99
RPA1-206ENST00000573994 ACTR6Q9GZN1 396 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 SAP130Q9H0E3 1048 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 CXXC4Q9H2H0 198 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 SLC38A1Q9H2H9 487 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 UBTD1Q9HAC8 227 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 CTPS2Q9NRF8 586 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 SDR39U1Q9NRG7 319 aaPredicted RBP8.89□□□□□ -0.99
RPA1-206ENST00000573994 PLSCR4Q9NRQ2 329 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 ACER3Q9NUN7 267 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 ZNF226Q9NYT6 803 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 ZIM2Q9NZV7 527 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 GDF2Q9UK05 429 aaPredicted RBP8.89□□□□□ -0.99
RPA1-206ENST00000573994 LIPT1Q9Y234 373 aa8.89□□□□□ -0.99
RPA1-206ENST00000573994 SETD2Q9BYW2 2564 aaPredicted RBP8.89□□□□□ -0.99
RPA1-206ENST00000573994 AGAP5A6NIR3 686 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 POLR3GO15318 223 aaPredicted RBP8.88□□□□□ -0.99
RPA1-206ENST00000573994 TGDSO95455 350 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 ANP32DO95626 131 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 KRT75O95678 551 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 BCHEP06276 602 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 THBDP07204 575 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 TFPIP10646 304 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 PPP3CBP16298 524 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 EDNRAP25101 427 aa8.88□□□□□ -0.99
RPA1-206ENST00000573994 CRATP43155 626 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms