RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 ROPN1Q9HAT0 212 aaPredicted RBP13.06□□□□□ -0.32
NDE1-203ENST00000570727 NOP53Q9NZM5 478 aaKnown RBP13.06□□□□□ -0.32
NDE1-203ENST00000570727 NPAP1Q9NZP6 1156 aa13.06□□□□□ -0.32
NDE1-203ENST00000570727 YLPM1P49750 1951 aaKnown RBP13.05□□□□□ -0.32
NDE1-203ENST00000570727 FBN3Q75N90 2809 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 RNF103-CHMP3A0A140T963 221 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 A0A1W2PP18 115 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 IGHV4-39P01824 125 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 FESP07332 822 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 GUSBP08236 651 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 UBTFL6P0CB48 400 aaPredicted RBP13.05□□□□□ -0.32
NDE1-203ENST00000570727 PGCP20142 388 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 VSNL1P62760 191 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 FAPQ12884 760 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 MAD2L1Q13257 205 aaPredicted RBP13.05□□□□□ -0.32
NDE1-203ENST00000570727 PPA1Q15181 289 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 STK11Q15831 433 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 SYT14P1Q58G82 188 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 TIMM23BQ5SRD1 257 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 MTDHQ86UE4 582 aaKnown RBP13.05□□□□□ -0.32
NDE1-203ENST00000570727 ZNF433Q8N7K0 673 aaPredicted RBP13.05□□□□□ -0.32
NDE1-203ENST00000570727 FAM71CQ8NEG0 241 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 OR8J2Q8NGG1 315 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 TMEM234Q8WY98 164 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 GTPBP3Q969Y2 492 aaKnown RBP13.05□□□□□ -0.32
NDE1-203ENST00000570727 SLC35G5Q96KT7 338 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 TRAF4Q9BUZ4 470 aaPredicted RBP13.05□□□□□ -0.32
NDE1-203ENST00000570727 CCDC106Q9BWC9 280 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 GRIP2Q9C0E4 1043 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 C20orf27Q9GZN8 174 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 SAP130Q9H0E3 1048 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 AKTIPQ9H8T0 292 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 SERINC1Q9NRX5 453 aa13.05□□□□□ -0.32
NDE1-203ENST00000570727 CISD1Q9NZ45 108 aaKnown RBP13.05□□□□□ -0.32
NDE1-203ENST00000570727 GDF2Q9UK05 429 aaPredicted RBP13.05□□□□□ -0.32
NDE1-203ENST00000570727 IGKV3D-15A0A087WSY6 115 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 GOLGA8QA0A0J9YX86 632 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 PRAMEF27A3QJZ7 478 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 GOLGA8OA6NCC3 632 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 GOLGA8NF8WBI6 632 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 SULT2B1O00204 365 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 C1QCP02747 245 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 OR12D1P0DN82 309 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 PLAURQ03405 335 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 IFFO1Q0D2I5 559 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 FUT5Q11128 374 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 PDK3Q15120 406 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 ABLIM2Q6H8Q1 611 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 TYW3Q6IPR3 259 aaKnown RBP13.04□□□□□ -0.32
NDE1-203ENST00000570727 EIF3MQ7L2H7 374 aaKnown RBP13.04□□□□□ -0.32
NDE1-203ENST00000570727 C16orf62Q7Z3J2 963 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 GALNT5Q7Z7M9 940 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 DTX2Q86UW9 622 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 P2RY8Q86VZ1 359 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 NUDCD3Q8IVD9 361 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 ZNF100Q8IYN0 542 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 OR4A15Q8NGL6 344 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 XAGE5Q8WWM1 108 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 RAB8BQ92930 207 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 MUCL1Q96DR8 90 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 ARL5BQ96KC2 179 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 PPP1R36Q96LQ0 422 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 ZIM3Q96PE6 472 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 CTPS2Q9NRF8 586 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 EXD2Q9NVH0 621 aa13.04□□□□□ -0.32
NDE1-203ENST00000570727 PRSS51A0A1B0GVH4 220 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 OR5H1A6NKK0 313 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 ZNF716A6NP11 495 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 ANKRD28O15084 1053 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 KIAA0513O60268 411 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 ADAM11O75078 769 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 GGT1P19440 569 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 PTNP21246 168 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 UQCRC2P22695 453 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 APOBEC1P41238 236 aaKnown RBP13.03□□□□□ -0.32
NDE1-203ENST00000570727 CSNK2A1P68400 391 aaPredicted RBP13.03□□□□□ -0.32
NDE1-203ENST00000570727 PDCD2Q16342 344 aaPredicted RBP13.03□□□□□ -0.32
NDE1-203ENST00000570727 FBXW9Q5XUX1 488 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 SAXO2Q658L1 398 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 TNFAIP8L2Q6P589 184 aaPredicted RBP13.03□□□□□ -0.32
NDE1-203ENST00000570727 ANKRD46Q86W74 232 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 LSRQ86X29 649 aaPredicted RBP13.03□□□□□ -0.32
NDE1-203ENST00000570727 ADGRG3Q86Y34 549 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 ZNF781Q8N8C0 355 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 SLC25A43Q8WUT9 341 aaPredicted RBP13.03□□□□□ -0.32
NDE1-203ENST00000570727 ROPN1LQ96C74 230 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 DNAJA3Q96EY1 480 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 PKNOX2Q96KN3 472 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 POLE3Q9NRF9 147 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 PCDHGB4Q9UN71 923 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 B3GALT5Q9Y2C3 310 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 WDR45Q9Y484 360 aa13.03□□□□□ -0.32
NDE1-203ENST00000570727 WDR91A4D1P6 747 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 CLDN24A6NM45 220 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 ABCD4O14678 606 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 CPSF4O95639 269 aaKnown RBP13.02□□□□□ -0.33
NDE1-203ENST00000570727 PMS2P2O95744 297 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 AGR2O95994 175 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 IGHV3-9P01782 118 aa13.02□□□□□ -0.33
NDE1-203ENST00000570727 TFPIP10646 304 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms