RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 ZNF385AQ96PM9 386 aaKnown RBP6.18□□□□□ -1.42
SMG6-205ENST00000570659 BBS4Q96RK4 519 aa6.18□□□□□ -1.42
SMG6-205ENST00000570659 OSBPL9Q96SU4 736 aa6.18□□□□□ -1.42
SMG6-205ENST00000570659 USB1Q9BQ65 265 aaKnown RBP6.18□□□□□ -1.42
SMG6-205ENST00000570659 FAIM2Q9BWQ8 316 aa6.18□□□□□ -1.42
SMG6-205ENST00000570659 MRPL37Q9BZE1 423 aaKnown RBP6.18□□□□□ -1.42
SMG6-205ENST00000570659 SAP130Q9H0E3 1048 aa6.18□□□□□ -1.42
SMG6-205ENST00000570659 ELOVL6Q9H5J4 265 aa6.18□□□□□ -1.42
SMG6-205ENST00000570659 FKRPQ9H9S5 495 aa6.18□□□□□ -1.42
SMG6-205ENST00000570659 MYOZ1Q9NP98 299 aaPredicted RBP6.18□□□□□ -1.42
SMG6-205ENST00000570659 ZNF275Q9NSD4 429 aaPredicted RBP6.18□□□□□ -1.42
SMG6-205ENST00000570659 SIRT3Q9NTG7 399 aaPredicted RBP6.18□□□□□ -1.42
SMG6-205ENST00000570659 DDX18Q9NVP1 670 aaKnown RBP6.18□□□□□ -1.42
SMG6-205ENST00000570659 ASB6Q9NWX5 421 aa6.18□□□□□ -1.42
SMG6-205ENST00000570659 SENP1Q9P0U3 644 aa6.18□□□□□ -1.42
SMG6-205ENST00000570659 VPS29Q9UBQ0 182 aa6.18□□□□□ -1.42
SMG6-205ENST00000570659 PSME2Q9UL46 239 aa6.18□□□□□ -1.42
SMG6-205ENST00000570659 NOSIPQ9Y314 301 aaKnown RBP6.18□□□□□ -1.42
SMG6-205ENST00000570659 SNX24Q9Y343 169 aa6.18□□□□□ -1.42
SMG6-205ENST00000570659 POLR3HQ9Y535 204 aaPredicted RBP6.18□□□□□ -1.42
SMG6-205ENST00000570659 TIMM22Q9Y584 194 aa6.18□□□□□ -1.42
SMG6-205ENST00000570659 CORINQ9Y5Q5 1042 aa6.18□□□□□ -1.42
SMG6-205ENST00000570659 NOTCH3Q9UM47 2321 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 A0A096LPE4 126 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 GNG14A0A1W2PPG7 69 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 A0A1W2PPZ6 126 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 ZC3H12DA2A288 527 aaKnown RBP6.17□□□□□ -1.42
SMG6-205ENST00000570659 NPIPB8E9PQR5 432 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 COQ9O75208 318 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 IGLV1-44P01699 117 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 C1QCP02747 245 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 SAGP10523 405 aaPredicted RBP6.17□□□□□ -1.42
SMG6-205ENST00000570659 IMPDH2P12268 514 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 ALDH3B1P43353 468 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 LIMS1P48059 325 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 PRKAG1P54619 331 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 TBRG1Q3YBR2 411 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 UNC50Q53HI1 259 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 MROH9Q5TGP6 573 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 ASPHD2Q6ICH7 369 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 C11orf87Q6NUJ2 197 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 CDC73Q6P1J9 531 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 SHQ1Q6PI26 577 aaKnown RBP6.17□□□□□ -1.42
SMG6-205ENST00000570659 LRIG3Q6UXM1 1119 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 CASP12Q6UXS9 341 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 TMPPEQ6ZT21 453 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 SPATA21Q7Z572 469 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 CTAGE3PQ8IX95 158 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 ACTRT1Q8TDG2 376 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 ATP6V1E2Q96A05 226 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 ZNF837Q96EG3 531 aaPredicted RBP6.17□□□□□ -1.42
SMG6-205ENST00000570659 SLC38A2Q96QD8 506 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 SERHL2Q9H4I8 314 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 BRF2Q9HAW0 419 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 MED29Q9NX70 200 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 AHSPQ9NZD4 102 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 GRHL1Q9NZI5 618 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 FZR1Q9UM11 496 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 FLVCR1Q9Y5Y0 555 aa6.17□□□□□ -1.42
SMG6-205ENST00000570659 NUP214P35658 2090 aaPredicted RBP6.16□□□□□ -1.42
SMG6-205ENST00000570659 IGHV3OR16-10A0A075B7F0 116 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 A0A096LPK6 155 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 IGHV2OR16-5A0A0B4J2B6 119 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 A0A1W2PQD3 144 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 A8MT66 165 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 TRIM49D1C9J1S8 452 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 G3V4G9 280 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 ZNF500O60304 480 aaPredicted RBP6.16□□□□□ -1.42
SMG6-205ENST00000570659 DNAJA2O60884 412 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 GUCY1B2O75343 617 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 SEC14L2O76054 403 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 SNUPNO95149 360 aaKnown RBP6.16□□□□□ -1.42
SMG6-205ENST00000570659 KLHL2O95198 593 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 KCNH1O95259 989 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 NUDT14O95848 222 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 ANXA4P09525 319 aaPredicted RBP6.16□□□□□ -1.42
SMG6-205ENST00000570659 CCNA2P20248 432 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 PRTN3P24158 256 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 SLC7A1P30825 629 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 MPIP34949 423 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 HSD17B3P37058 310 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 MAGEB1P43366 347 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 CLK3P49761 638 aaKnown RBP6.16□□□□□ -1.42
SMG6-205ENST00000570659 P2RX1P51575 399 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 SLC16A1P53985 500 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 SESN3P58005 492 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 H3F3AP84243 136 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 MVKQ03426 396 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 SELENBP1Q13228 472 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 SKP2Q13309 424 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 SLC9A3R2Q15599 337 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 MAPK14Q16539 360 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 OCLNQ16625 522 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 ALKBH6Q3KRA9 238 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 SPRNQ5BIV9 151 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 TMEM255AQ5JRV8 349 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 GALNT18Q6P9A2 607 aa6.16□□□□□ -1.42
SMG6-205ENST00000570659 CCBE1Q6UXH8 406 aaPredicted RBP6.16□□□□□ -1.42
SMG6-205ENST00000570659 MTDHQ86UE4 582 aaKnown RBP6.16□□□□□ -1.42
SMG6-205ENST00000570659 KIR3DL3Q8N743 410 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms