RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 POLHQ9Y253 713 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 RTTNQ86VV8 2226 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 H7C1C5 153 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 IMPA2O14732 288 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 THY1P04216 161 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 SBK2P0C263 348 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 LCN6P62502 163 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 DUSP6Q16828 381 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 ARMC6Q6NXE6 501 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 ZNF613Q6PF04 617 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 ZNF767PQ75MW2 155 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 SSX6Q7RTT6 188 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 OOSP2Q86WS3 158 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 OR2L8Q8NGY9 312 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 PTP4A1Q93096 173 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 PEX11GQ96HA9 241 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 TSSK2Q96PF2 358 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 MARVELD1Q9BSK0 173 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 TMEM106CQ9BVX2 250 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 RAB11FIP5Q9BXF6 653 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 SEMA4CQ9C0C4 833 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 NIPAL2Q9H841 368 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 HCN3Q9P1Z3 774 aa14.19□□□□□ -0.14
USP43-202ENST00000570475 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.19□□□□□ -0.14
USP43-202ENST00000570475 URADA6NGE7 173 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 TVP23AA6NH52 213 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 SYT5O00445 386 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 CHP2O43745 196 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 ZNF10P21506 573 aaPredicted RBP14.18□□□□□ -0.14
USP43-202ENST00000570475 DRD3P35462 400 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 VEGFBP49765 207 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 RUNX3Q13761 415 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 RUNX2Q13950 521 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 TMEM52BQ4KMG9 183 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 TCTE3Q8IZS6 198 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 ZNF511Q8NB15 262 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 DNAAF1Q8NEP3 725 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 COQ8AQ8NI60 647 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 TCF7L1Q9HCS4 588 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 ASB6Q9NWX5 421 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 MGAT4CQ9UBM8 478 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 NOTCH4Q99466 2003 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 LOC100509620A0A075B734 347 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 FXYD6-FXYD2A0A087WZ82 144 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 M0R233 179 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 ATF1P18846 271 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 LCN1P31025 176 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 PRKAR1BP31321 381 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 MTNR1BP49286 362 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 BLVRAP53004 296 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 UBE2MP61081 183 aaKnown RBP14.18□□□□□ -0.14
USP43-202ENST00000570475 TRA2BP62995 288 aaKnown RBP14.18□□□□□ -0.14
USP43-202ENST00000570475 SNTA1Q13424 505 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 EOGTQ5NDL2 527 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 COMMD7Q86VX2 200 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 SFTPA2Q8IWL1 248 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 OR4N2Q8NGD1 307 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 FXYD6Q9H0Q3 95 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 TMEM74BQ9NUR3 256 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 MRPS2Q9Y399 296 aaKnown RBP14.18□□□□□ -0.14
USP43-202ENST00000570475 BRWD1Q9NSI6 2320 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 CABIN1Q9Y6J0 2220 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 DOK2O60496 412 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 SELENOFO60613 162 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 RDH16O75452 317 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 ARL6IP5O75915 188 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 ZGLP1P0C6A0 271 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 PKLRP30613 574 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 GDNFP39905 211 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 FGL2Q14314 439 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 FIGLAQ6QHK4 219 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 METAP1DQ6UB28 335 aaPredicted RBP14.18□□□□□ -0.14
USP43-202ENST00000570475 ZAR1Q86SH2 424 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 SFXN5Q8TD22 340 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 RAB7BQ96AH8 199 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 APOOQ9BUR5 198 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 HRASLS2Q9NWW9 162 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 NDOR1Q9UHB4 597 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 MAFFQ9ULX9 164 aa14.18□□□□□ -0.14
USP43-202ENST00000570475 FGF17O60258 216 aa14.17□□□□□ -0.14
USP43-202ENST00000570475 ERVK-21P61565 698 aa14.17□□□□□ -0.14
USP43-202ENST00000570475 CD300LDQ6UXZ3 194 aa14.17□□□□□ -0.14
USP43-202ENST00000570475 TMEM64Q6YI46 380 aa14.17□□□□□ -0.14
USP43-202ENST00000570475 GPALPP1Q8IXQ4 340 aa14.17□□□□□ -0.14
USP43-202ENST00000570475 OR11H7Q8NGC8 314 aa14.17□□□□□ -0.14
USP43-202ENST00000570475 SIPA1Q96FS4 1042 aa14.17□□□□□ -0.14
USP43-202ENST00000570475 OR2M4Q96R27 311 aa14.17□□□□□ -0.14
USP43-202ENST00000570475 PIGUQ9H490 435 aa14.17□□□□□ -0.14
USP43-202ENST00000570475 A0A1B0GWA3 101 aa14.17□□□□□ -0.14
USP43-202ENST00000570475 TRABD2BA6NFA1 517 aa14.17□□□□□ -0.14
USP43-202ENST00000570475 SIX6O95475 246 aa14.17□□□□□ -0.14
USP43-202ENST00000570475 CEACAM5P06731 702 aa14.17□□□□□ -0.14
USP43-202ENST00000570475 DBIP07108 87 aaKnown RBP14.17□□□□□ -0.14
USP43-202ENST00000570475 UCHL1P09936 223 aa14.17□□□□□ -0.14
USP43-202ENST00000570475 HTR2AP28223 471 aa14.17□□□□□ -0.14
USP43-202ENST00000570475 SLC6A6P31641 620 aa14.17□□□□□ -0.14
USP43-202ENST00000570475 ZNF619Q8N2I2 560 aa14.17□□□□□ -0.14
USP43-202ENST00000570475 ZNF680Q8NEM1 530 aa14.17□□□□□ -0.14
USP43-202ENST00000570475 NARS2Q96I59 477 aaKnown RBP14.17□□□□□ -0.14
USP43-202ENST00000570475 DDOQ99489 341 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms