RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 TYK2P29597 1187 aa6.17□□□□□ -1.42
SMG1-217ENST00000569764 DCTDP32321 178 aa6.17□□□□□ -1.42
SMG1-217ENST00000569764 SPRP35270 261 aaPredicted RBP6.17□□□□□ -1.42
SMG1-217ENST00000569764 RPL3P39023 403 aaKnown RBP6.17□□□□□ -1.42
SMG1-217ENST00000569764 ETV4P43268 484 aa6.17□□□□□ -1.42
SMG1-217ENST00000569764 CSRP3P50461 194 aa6.17□□□□□ -1.42
SMG1-217ENST00000569764 ZXDBP98169 803 aa6.17□□□□□ -1.42
SMG1-217ENST00000569764 SERTAD2Q14140 314 aa6.17□□□□□ -1.42
SMG1-217ENST00000569764 EIF2S3LQ2VIR3 472 aaKnown RBP6.17□□□□□ -1.42
SMG1-217ENST00000569764 ZNF542PQ5EBM4 170 aa6.17□□□□□ -1.42
SMG1-217ENST00000569764 RNASEKQ6P5S7 137 aaKnown RBP6.17□□□□□ -1.42
SMG1-217ENST00000569764 HS3ST5Q8IZT8 346 aa6.17□□□□□ -1.42
SMG1-217ENST00000569764 ZDHHC16Q969W1 377 aa6.17□□□□□ -1.42
SMG1-217ENST00000569764 HAVCR1Q96D42 359 aa6.17□□□□□ -1.42
SMG1-217ENST00000569764 TP63Q9H3D4 680 aaPredicted RBP6.17□□□□□ -1.42
SMG1-217ENST00000569764 ALKBH4Q9NXW9 302 aa6.17□□□□□ -1.42
SMG1-217ENST00000569764 GOLT1BQ9Y3E0 138 aa6.17□□□□□ -1.42
SMG1-217ENST00000569764 ACACAQ13085 2346 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 LTBP2Q14767 1821 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 MED19A0JLT2 244 aaPredicted RBP6.16□□□□□ -1.42
SMG1-217ENST00000569764 OR2A25A4D2G3 310 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 ZNF785A8K8V0 405 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 A8MUA0 341 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 YY2O15391 372 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 SCELO95171 688 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 C8GP07360 202 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 THBS1P07996 1170 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 ARRB2P32121 409 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 CSF2RBP32927 897 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 TIRAPP58753 221 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 EGR3Q06889 387 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 AIMP2Q13155 320 aaKnown RBP6.16□□□□□ -1.42
SMG1-217ENST00000569764 FGFBP1Q14512 234 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 PAN3Q58A45 887 aaKnown RBP6.16□□□□□ -1.42
SMG1-217ENST00000569764 PLA2G2CQ5R387 149 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 LIPIQ6XZB0 460 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 MCUQ8NE86 351 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 OR52B4Q8NGK2 314 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 GAL3ST3Q96A11 431 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 NMUR2Q9GZQ4 415 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 ALX4Q9H161 411 aaPredicted RBP6.16□□□□□ -1.42
SMG1-217ENST00000569764 BEX1Q9HBH7 125 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 SIRT7Q9NRC8 400 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 PITPNC1Q9UKF7 332 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 ADAM18Q9Y3Q7 739 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 PCDHGC4Q9Y5F7 938 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 A0A0J9YYE9 177 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 SDR42E2A6NKP2 422 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 PATE3B3GLJ2 98 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 SNX3O60493 162 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 TRBC1P01850 177 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 SERPINA6P08185 405 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 HOXD4P09016 255 aaPredicted RBP6.16□□□□□ -1.42
SMG1-217ENST00000569764 RBP1P09455 135 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 IGFBP5P24593 272 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 SGSHP51688 502 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 RAG2P55895 527 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 CDK3Q00526 305 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 COL28A1Q2UY09 1125 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 TRIM40Q6P9F5 258 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 MMP21Q8N119 569 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 SLC34A3Q8N130 599 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 TMEM132CQ8N3T6 1108 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 OR2A12Q8NGT7 310 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 ECHDC3Q96DC8 303 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 PLXNA4Q9HCM2 1894 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 FAM230AA0A1W2PPH8 454 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 A0A1W2PPQ1 181 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 J3KR12 359 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 EIF1BO60739 113 aaKnown RBP6.16□□□□□ -1.42
SMG1-217ENST00000569764 LYNP07948 512 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 CDH1P12830 882 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 EEF1B2P24534 225 aaKnown RBP6.16□□□□□ -1.42
SMG1-217ENST00000569764 CRHR1P34998 444 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 EIF1P41567 113 aaKnown RBP6.16□□□□□ -1.42
SMG1-217ENST00000569764 CLDN2P57739 230 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 TOMM34Q15785 309 aaPredicted RBP6.16□□□□□ -1.42
SMG1-217ENST00000569764 PRAMEF7Q5VXH5 474 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 VWA1Q6PCB0 445 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 RPTNQ6XPR3 784 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 Q6ZVL8 140 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 ABHD12BQ7Z5M8 362 aaPredicted RBP6.16□□□□□ -1.42
SMG1-217ENST00000569764 AMIGO1Q86WK6 493 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 CENPSQ8N2Z9 138 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 OR10Q1Q8NGQ4 319 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 YIPF5Q969M3 257 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 CPNE4Q96A23 557 aaPredicted RBP6.16□□□□□ -1.42
SMG1-217ENST00000569764 TESCQ96BS2 214 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 SMIM14Q96QK8 99 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 OR5B2Q96R09 309 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 NEURL2Q9BR09 285 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 TOLLIPQ9H0E2 274 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 ZNF768Q9H5H4 540 aaKnown RBP6.16□□□□□ -1.42
SMG1-217ENST00000569764 FGF21Q9NSA1 209 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 HAO2Q9NYQ3 351 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 ADAM30Q9UKF2 790 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 POU2F3Q9UKI9 436 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 WASF3Q9UPY6 502 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 CA5BQ9Y2D0 317 aa6.16□□□□□ -1.42
SMG1-217ENST00000569764 VPS13AQ96RL7 3174 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms