RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 HSPA12BQ96MM6 686 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 TNFRSF13CQ96RJ3 184 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 DDOQ99489 341 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 CHCHD6Q9BRQ6 235 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 CNPPD1Q9BV87 410 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 ASPNQ9BXN1 380 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 ENKD1Q9H0I2 346 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 OR52D1Q9H346 318 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 C12orf10Q9HB07 376 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 ZBTB20Q9HC78 741 aaPredicted RBP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 MEPEQ9NQ76 525 aaPredicted RBP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 HINT3Q9NQE9 182 aaKnown RBP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 EXOSC3Q9NQT5 275 aaKnown RBP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 CMC2Q9NRP2 79 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 UBQLN4Q9NRR5 601 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 CUTCQ9NTM9 273 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 C20orf141Q9NUB4 165 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 UCKL1Q9NWZ5 548 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 QPCTLQ9NXS2 382 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 GALNT8Q9NY28 637 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 ETAA1Q9NY74 926 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 CRNNQ9UBG3 495 aaPredicted RBP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 KLHL3Q9UH77 587 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 GMEB2Q9UKD1 530 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 MRTO4Q9UKD2 239 aaKnown RBP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 SSR3Q9UNL2 185 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 SIGLEC7Q9Y286 467 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 TRAPPC4Q9Y296 219 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 POLR3KQ9Y2Y1 108 aaPredicted RBP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 CAB39Q9Y376 341 aaPredicted RBP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 TMEM184BQ9Y519 407 aaPredicted RBP4.95□□□□□ -1.62
SF3B3-213ENST00000569687 SCN3AQ9NY46 2000 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 NINQ8N4C6 2090 aa4.95□□□□□ -1.62
SF3B3-213ENST00000569687 USP34Q70CQ2 3546 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 NPIPA5A0A0B4J1W7 369 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 LOC100506127A0A0U1RQW1 187 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 TCRBV16S1A1N1A0A5B0 115 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 FRG2CA6NGY1 282 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 SLC22A31A6NKX4 558 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 C17orf105B2RV13 164 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 TMEM150CB9EJG8 249 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 NPIPA7E9PJI5 369 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 LOC110117498-PIK3R3F6TDL0 507 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 ARPC3O15145 178 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 POLR1CO15160 346 aaPredicted RBP4.94□□□□□ -1.62
SF3B3-213ENST00000569687 DYRK3O43781 588 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 DUX1O43812 170 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 PFDN1O60925 122 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 ADAM11O75078 769 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 PEX14O75381 377 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 RFPL3O75679 317 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 DDAH2O95865 285 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 TSPAN19P0C672 248 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 NPIPA8P0DM63 369 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 PNMTP11086 282 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 HK1P19367 917 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 MAOAP21397 527 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 SLC2A5P22732 501 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 TGM1P22735 817 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 SLC6A6P31641 620 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 S100A5P33763 92 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 TGFBR1P36897 503 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 SLC1A3P43003 542 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 ARL4DP49703 201 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 SLC37A1P57057 533 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 CDC20Q12834 499 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 ELAVL1Q15717 326 aaKnown RBP4.94□□□□□ -1.62
SF3B3-213ENST00000569687 CLPPQ16740 277 aaPredicted RBP4.94□□□□□ -1.62
SF3B3-213ENST00000569687 ALG10BQ5I7T1 473 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 CLEC12AQ5QGZ9 265 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 WBP2NLQ6ICG8 309 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 NIPAL3Q6P499 406 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 TMEM71Q6P5X7 295 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 ZC3H14Q6PJT7 736 aaKnown RBP4.94□□□□□ -1.62
SF3B3-213ENST00000569687 HSDL2Q6YN16 418 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 TMPRSS11AQ6ZMR5 421 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 DPY19L2P2Q6ZN68 376 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 CXXC5Q7LFL8 322 aaKnown RBP4.94□□□□□ -1.62
SF3B3-213ENST00000569687 RABEPKQ7Z6M1 372 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 CCDC190Q86UF4 302 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 C11orf74Q86VG3 221 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 SULF2Q8IWU5 870 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 SLC35F3Q8IY50 421 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 KLHL36Q8N4N3 616 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 ACBD7Q8N6N7 88 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 ARIH2OSQ8N7S6 290 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 FAM181AQ8N9Y4 354 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 C17orf47Q8NEP4 570 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 OR52L1Q8NGH7 329 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 OR4C6Q8NH72 309 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 OR1L3Q8NH93 324 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 OR14A16Q8NHC5 309 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 PFN4Q8NHR9 129 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 B4GALNT2Q8NHY0 566 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 ZNF721Q8TF20 911 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 TM9SF4Q92544 642 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 EDAQ92838 391 aa4.94□□□□□ -1.62
SF3B3-213ENST00000569687 RNF166Q96A37 237 aaPredicted RBP4.94□□□□□ -1.62
SF3B3-213ENST00000569687 AHCYL2Q96HN2 611 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms