RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 IQCCQ4KMZ1 466 aa21.22■□□□□ 0.99
RAB40C-212ENST00000569575 C3orf33Q6P1S2 294 aa21.22■□□□□ 0.99
RAB40C-212ENST00000569575 YRDCQ86U90 279 aaKnown RBP21.22■□□□□ 0.99
RAB40C-212ENST00000569575 C3orf49Q96BT1 292 aa21.22■□□□□ 0.99
RAB40C-212ENST00000569575 SARAFQ96BY9 339 aa21.22■□□□□ 0.99
RAB40C-212ENST00000569575 PIP5K1AQ99755 562 aa21.22■□□□□ 0.99
RAB40C-212ENST00000569575 WFDC6Q9BQY6 131 aa21.22■□□□□ 0.99
RAB40C-212ENST00000569575 FNDC11Q9BVV2 318 aa21.22■□□□□ 0.99
RAB40C-212ENST00000569575 SLC19A3Q9BZV2 496 aa21.22■□□□□ 0.99
RAB40C-212ENST00000569575 DEFB127Q9H1M4 99 aa21.22■□□□□ 0.99
RAB40C-212ENST00000569575 DENND2DQ9H6A0 471 aaPredicted RBP21.22■□□□□ 0.99
RAB40C-212ENST00000569575 CHRNA9Q9UGM1 479 aa21.22■□□□□ 0.99
RAB40C-212ENST00000569575 RIMS3Q9UJD0 308 aa21.22■□□□□ 0.99
RAB40C-212ENST00000569575 OSGIN1Q9UJX0 560 aa21.22■□□□□ 0.99
RAB40C-212ENST00000569575 A4GNTQ9UNA3 340 aa21.22■□□□□ 0.99
RAB40C-212ENST00000569575 COL6A6A6NMZ7 2263 aa21.21■□□□□ 0.99
RAB40C-212ENST00000569575 A0A087WUJ7 227 aa21.21■□□□□ 0.99
RAB40C-212ENST00000569575 NPIPA5E9PKD4 350 aa21.21■□□□□ 0.99
RAB40C-212ENST00000569575 ADAMDEC1O15204 470 aa21.21■□□□□ 0.99
RAB40C-212ENST00000569575 HNRNPRO43390 633 aaKnown RBP21.21■□□□□ 0.99
RAB40C-212ENST00000569575 GMFGO60234 142 aa21.21■□□□□ 0.99
RAB40C-212ENST00000569575 FREM3P0C091 2139 aa21.21■□□□□ 0.99
RAB40C-212ENST00000569575 EDN3P14138 238 aa21.21■□□□□ 0.99
RAB40C-212ENST00000569575 TNFRSF1BP20333 461 aa21.21■□□□□ 0.99
RAB40C-212ENST00000569575 RBM34P42696 430 aaKnown RBP21.21■□□□□ 0.99
RAB40C-212ENST00000569575 KPNB1Q14974 876 aaKnown RBP21.21■□□□□ 0.99
RAB40C-212ENST00000569575 SF3B4Q15427 424 aaKnown RBP eCLIP21.21■□□□□ 0.995e-9■■■■■ 30.3
RAB40C-212ENST00000569575 WIPI1Q5MNZ9 446 aaPredicted RBP21.21■□□□□ 0.99
RAB40C-212ENST00000569575 VASNQ6EMK4 673 aa21.21■□□□□ 0.99
RAB40C-212ENST00000569575 ATG4DQ86TL0 474 aaPredicted RBP21.21■□□□□ 0.99
RAB40C-212ENST00000569575 RBM45Q8IUH3 476 aaKnown RBP21.21■□□□□ 0.99
RAB40C-212ENST00000569575 PIK3C3Q8NEB9 887 aa21.21■□□□□ 0.99
RAB40C-212ENST00000569575 POC1BQ8TC44 478 aa21.21■□□□□ 0.99
RAB40C-212ENST00000569575 CHID1Q9BWS9 393 aa21.21■□□□□ 0.99
RAB40C-212ENST00000569575 EXO5Q9H790 373 aa21.21■□□□□ 0.99
RAB40C-212ENST00000569575 PAQR5Q9NXK6 330 aaPredicted RBP21.21■□□□□ 0.99
RAB40C-212ENST00000569575 LUZP4Q9P127 313 aa21.21■□□□□ 0.99
RAB40C-212ENST00000569575 NPIPA1Q9UND3 350 aa21.21■□□□□ 0.99
RAB40C-212ENST00000569575 AP4S1Q9Y587 144 aa21.21■□□□□ 0.99
RAB40C-212ENST00000569575 ITPR1Q14643 2758 aa21.21■□□□□ 0.99
RAB40C-212ENST00000569575 A0A1W2PRQ8 180 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 ELOA3DA6NLF2 546 aaPredicted RBP21.2■□□□□ 0.98
RAB40C-212ENST00000569575 BCKDKO14874 412 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 FKBP6O75344 327 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 IGF2P01344 180 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 MST1P26927 711 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 HOXC5Q00444 222 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 FOXF1Q12946 379 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 DGCR6Q14129 220 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 TRAM2Q15035 370 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 ELOA3BQ3SY89 546 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 LINC00114Q6XXX2 140 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 ADGRG3Q86Y34 549 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 PM20D2Q8IYS1 436 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 ELOA3Q8NG57 546 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 STK35Q8TDR2 534 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 ABTB1Q969K4 478 aaPredicted RBP21.2■□□□□ 0.98
RAB40C-212ENST00000569575 DDIT4LQ96D03 193 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 SLC41A3Q96GZ6 507 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 TMEM43Q9BTV4 400 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 RPH3AQ9Y2J0 694 aaPredicted RBP21.2■□□□□ 0.98
RAB40C-212ENST00000569575 V9GYQ6 96 aa21.2■□□□□ 0.98
RAB40C-212ENST00000569575 NCKAP5O14513 1909 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 TMED7-TICAM2A0A0A6YYA0 188 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 CPSF4LA6NMK7 179 aaKnown RBP21.19■□□□□ 0.98
RAB40C-212ENST00000569575 A8MVM7 634 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 PRSS23O95084 383 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 CPN1P15169 458 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 TDGF1P3P51864 188 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 HMGA2P52926 109 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 CDH12P55289 794 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 PIN1Q13526 163 aaPredicted RBP21.19■□□□□ 0.98
RAB40C-212ENST00000569575 COLEC12Q5KU26 742 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 PDSS1Q5T2R2 415 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 RNF113BQ8IZP6 322 aaKnown RBP21.19■□□□□ 0.98
RAB40C-212ENST00000569575 LINC00471Q8N535 108 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 CPT1CQ8TCG5 803 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 DHRS1Q96LJ7 313 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 EPYCQ99645 322 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 POTEKPQ9BYX7 375 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 NMNAT1Q9HAN9 279 aaPredicted RBP21.19■□□□□ 0.98
RAB40C-212ENST00000569575 CTPS2Q9NRF8 586 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 ASF1BQ9NVP2 202 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 NTNG1Q9Y2I2 539 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 TMED7Q9Y3B3 224 aa21.19■□□□□ 0.98
RAB40C-212ENST00000569575 hCG_2039718K7EN88 272 aa21.18■□□□□ 0.98
RAB40C-212ENST00000569575 SEMA7AO75326 666 aa21.18■□□□□ 0.98
RAB40C-212ENST00000569575 H1F0P07305 194 aaKnown RBP21.18■□□□□ 0.98
RAB40C-212ENST00000569575 CELA3AP09093 270 aa21.18■□□□□ 0.98
RAB40C-212ENST00000569575 RBPJQ06330 500 aa21.18■□□□□ 0.98
RAB40C-212ENST00000569575 OR2T5Q6IEZ7 315 aa21.18■□□□□ 0.98
RAB40C-212ENST00000569575 ESPNLQ6ZVH7 1005 aa21.18■□□□□ 0.98
RAB40C-212ENST00000569575 GDF7Q7Z4P5 450 aa21.18■□□□□ 0.98
RAB40C-212ENST00000569575 TSEN54Q7Z6J9 526 aaKnown RBP21.18■□□□□ 0.98
RAB40C-212ENST00000569575 ZNF605Q86T29 641 aa21.18■□□□□ 0.98
RAB40C-212ENST00000569575 OR2T29Q8NH02 315 aa21.18■□□□□ 0.98
RAB40C-212ENST00000569575 OR6S1Q8NH40 331 aa21.18■□□□□ 0.98
RAB40C-212ENST00000569575 ZNF426Q9BUY5 554 aa21.18■□□□□ 0.98
RAB40C-212ENST00000569575 SLC6A15Q9H2J7 730 aa21.18■□□□□ 0.98
RAB40C-212ENST00000569575 HDGFL3Q9Y3E1 203 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms