RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 PABPC4LP0CB38 370 aaKnown RBP6.95□□□□□ -1.3
CDH3-209ENST00000569080 PGCP20142 388 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 DNASE1P24855 282 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 SLC7A1P30825 629 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 HOXC12P31275 282 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 MAGEA8P43361 318 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 KCNJ5P48544 419 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 DIO1P49895 249 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 ADAM8P78325 824 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 KCNJ10P78508 379 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 MERTKQ12866 999 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 FOXD4Q12950 439 aaPredicted RBP6.95□□□□□ -1.3
CDH3-209ENST00000569080 GSTA3Q16772 222 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 GPAT3Q53EU6 434 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 MRPL2Q5T653 305 aaKnown RBP6.95□□□□□ -1.3
CDH3-209ENST00000569080 FBXW10Q5XX13 1052 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 ANKRD34AQ69YU3 496 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 EPGNQ6UW88 154 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 LRRC74BQ6ZQY2 392 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 ZNF621Q6ZSS3 439 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 GRINAQ7Z429 371 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 TRIML2Q8N7C3 387 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 ATP6V1C2Q8NEY4 427 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 SLC25A43Q8WUT9 341 aaPredicted RBP6.95□□□□□ -1.3
CDH3-209ENST00000569080 CNOT9Q92600 299 aaKnown RBP6.95□□□□□ -1.3
CDH3-209ENST00000569080 PIK3IP1Q96FE7 263 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 ZC3HAV1LQ96H79 300 aaKnown RBP6.95□□□□□ -1.3
CDH3-209ENST00000569080 ARL5BQ96KC2 179 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 ATP6V1G3Q96LB4 118 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 OR5B2Q96R09 309 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 ZNF300Q96RE9 604 aaPredicted RBP6.95□□□□□ -1.3
CDH3-209ENST00000569080 ZBTB18Q99592 522 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 TMEM204Q9BSN7 226 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 KLHL4Q9C0H6 718 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 ACTR6Q9GZN1 396 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 OR10A4Q9H209 315 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 SLC52A3Q9NQ40 469 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 TIGARQ9NQ88 270 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 CTPS2Q9NRF8 586 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 CHRNA9Q9UGM1 479 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 LIPT1Q9Y234 373 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 CHST2Q9Y4C5 530 aa6.95□□□□□ -1.3
CDH3-209ENST00000569080 IGKV3D-15A0A087WSY6 115 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 TRBV5-3A0A0A0MS03 114 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 FAM234BA2RU67 622 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 CDHR4A6H8M9 788 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 ZNF716A6NP11 495 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 CASKO14936 926 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 UBDO15205 165 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 DIAPH2O60879 1101 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 RAMP1O60894 148 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 PRKD3O94806 890 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 YES1P07947 543 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 BMP2P12643 396 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 ETFAP13804 333 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 PPP3CBP16298 524 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 COX5AP20674 150 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 APOBEC1P41238 236 aaKnown RBP6.94□□□□□ -1.3
CDH3-209ENST00000569080 OR3A2P47893 321 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 POLR2JP52435 117 aaKnown RBP6.94□□□□□ -1.3
CDH3-209ENST00000569080 HPCAP84074 193 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 EPS8Q12929 822 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 KEAP1Q14145 624 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 TSC22D1Q15714 1073 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 TMEM201Q5SNT2 666 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 NXNQ6DKJ4 435 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 ZNF836Q6ZNA1 936 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 TMPPEQ6ZT21 453 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 BEND4Q6ZU67 534 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 ADGRG3Q86Y34 549 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 FUNDC1Q8IVP5 155 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 MSRB3Q8IXL7 192 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 CMIPQ8IY22 773 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 C10orf111Q8N326 155 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 SLC43A2Q8N370 569 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 WFDC11Q8NEX6 87 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 SLC38A5Q8WUX1 472 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 WDR60Q8WVS4 1066 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 TMEM234Q8WY98 164 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 GTF2H4Q92759 462 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 S100PBPQ96BU1 408 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 EBF4Q9BQW3 602 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 RSPO3Q9BXY4 272 aaPredicted RBP6.94□□□□□ -1.3
CDH3-209ENST00000569080 OR11A1Q9GZK7 315 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 PAIP1Q9H074 479 aaKnown RBP6.94□□□□□ -1.3
CDH3-209ENST00000569080 TPT1P8Q9HAU6 139 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.94□□□□□ -1.3
CDH3-209ENST00000569080 BEX4Q9NWD9 120 aaPredicted RBP6.94□□□□□ -1.3
CDH3-209ENST00000569080 SLC25A37Q9NYZ2 338 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 KLHL9Q9P2J3 617 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 P2RX2Q9UBL9 471 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 OSGIN1Q9UJX0 560 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 GPR52Q9Y2T5 361 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 NAV3Q8IVL0 2385 aa6.94□□□□□ -1.3
CDH3-209ENST00000569080 DSCAMO60469 2012 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 TMEM72A0PK05 275 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 ZC3H12DA2A288 527 aaKnown RBP6.93□□□□□ -1.3
CDH3-209ENST00000569080 ZNF724A8MTY0 619 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 DNPH1O43598 174 aa6.93□□□□□ -1.3
CDH3-209ENST00000569080 KRT75O95678 551 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms