RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 A0A1B0GWA3 101 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 PRRG2O14669 202 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 CPN1P15169 458 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 ZNF708P17019 499 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 CLDN18P56856 261 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 KCNC4Q03721 635 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 SELENBP1Q13228 472 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 OR1Q1Q15612 314 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.1■□□□□ 0.01
COMMD4-224ENST00000568877 YTHDF3Q7Z739 585 aaKnown RBP15.1■□□□□ 0.01
COMMD4-224ENST00000568877 ADGRG3Q86Y34 549 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 PM20D2Q8IYS1 436 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 LILRA2Q8N149 483 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 FAM86B1Q8N7N1 296 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 OR5M9Q8NGP3 310 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 SMPDL3BQ92485 455 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 C3orf49Q96BT1 292 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 PYURFQ96I23 114 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 TMEM185BQ9H7F4 350 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 PNPLA3Q9NST1 481 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 SLC7A8Q9UHI5 535 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 OSGIN1Q9UJX0 560 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 CAMK2AQ9UQM7 478 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 POMPQ9Y244 141 aa15.1■□□□□ 0.01
COMMD4-224ENST00000568877 SHANK1Q9Y566 2161 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 TMED7-TICAM2A0A0A6YYA0 188 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 CPSF4LA6NMK7 179 aaKnown RBP15.09■□□□□ 0.01
COMMD4-224ENST00000568877 OPN1LWP04000 364 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 IFNW1P05000 195 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 GNLYP22749 145 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 CXCR1P25024 350 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 CLDN20P56880 219 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 SRYQ05066 204 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 C3AR1Q16581 482 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 EMC4Q5J8M3 183 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 ENTPD8Q5MY95 495 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 C3orf33Q6P1S2 294 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 ZNF613Q6PF04 617 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 ULK3Q6PHR2 472 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 DEF8Q6ZN54 512 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 ATG4DQ86TL0 474 aaPredicted RBP15.09■□□□□ 0.01
COMMD4-224ENST00000568877 CD163Q86VB7 1156 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 UBQLNLQ8IYU4 475 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 ATP6V1C2Q8NEY4 427 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 PHF10Q8WUB8 498 aaKnown RBP15.09■□□□□ 0.01
COMMD4-224ENST00000568877 DNAJA4Q8WW22 397 aaPredicted RBP15.09■□□□□ 0.01
COMMD4-224ENST00000568877 LRGUKQ96M69 825 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 AMBRA1Q9C0C7 1298 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 C12orf10Q9HB07 376 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 CHRNA9Q9UGM1 479 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 OSGIN2Q9Y236 505 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 TMED7Q9Y3B3 224 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 SPIN1Q9Y657 262 aaPredicted RBP15.09■□□□□ 0.01
COMMD4-224ENST00000568877 V9GYQ6 96 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 HEATR5AQ86XA9 2040 aa15.09■□□□□ 0.01
COMMD4-224ENST00000568877 A0A0B4J2E0 115 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 A0A1B0GX12 115 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 TCRBV5S2A0A599 114 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 GJE1A6NN92 205 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 SEC14L5O43304 696 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 SEMA7AO75326 666 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 CCNA2P20248 432 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 FKBP2P26885 142 aaKnown RBP15.08■□□□□ 0
COMMD4-224ENST00000568877 SFTPDP35247 375 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 UQCRFS1P47985 274 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 MAP2K6P52564 334 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 SUCLG1P53597 346 aaKnown RBP15.08■□□□□ 0
COMMD4-224ENST00000568877 CLDN15P56746 228 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 ALG10BQ5I7T1 473 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 ZNF585AQ6P3V2 769 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 GGNQ86UU5 652 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 TSPYL5Q86VY4 417 aaPredicted RBP15.08■□□□□ 0
COMMD4-224ENST00000568877 DOLPP1Q86YN1 238 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 MEIOBQ8N635 442 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 ADAMTS16Q8TE57 1224 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 SLC25A43Q8WUT9 341 aaPredicted RBP15.08■□□□□ 0
COMMD4-224ENST00000568877 POP5Q969H6 163 aaKnown RBP15.08■□□□□ 0
COMMD4-224ENST00000568877 SLC47A1Q96FL8 570 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 KLHL15Q96M94 604 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 TRIM15Q9C019 465 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 POLR2J2Q9GZM3 115 aaKnown RBP15.08■□□□□ 0
COMMD4-224ENST00000568877 POLR2J3Q9H1A7 115 aaKnown RBP15.08■□□□□ 0
COMMD4-224ENST00000568877 ALKBH4Q9NXW9 302 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 SELENONQ9NZV5 590 aa15.08■□□□□ 0
COMMD4-224ENST00000568877 TRGV8A0A0C4DH27 118 aa15.07■□□□□ 0
COMMD4-224ENST00000568877 TMEM72A0PK05 275 aa15.07■□□□□ 0
COMMD4-224ENST00000568877 TRAPPC13A5PLN9 417 aa15.07■□□□□ 0
COMMD4-224ENST00000568877 FIGNL2A6NMB9 653 aa15.07■□□□□ 0
COMMD4-224ENST00000568877 AHRRA9YTQ3 701 aa15.07■□□□□ 0
COMMD4-224ENST00000568877 H0Y3Z8 333 aa15.07■□□□□ 0
COMMD4-224ENST00000568877 H0YC42 278 aa15.07■□□□□ 0
COMMD4-224ENST00000568877 ZNF208O43345 1280 aa15.07■□□□□ 0
COMMD4-224ENST00000568877 STSP08842 583 aa15.07■□□□□ 0
COMMD4-224ENST00000568877 PNMTP11086 282 aa15.07■□□□□ 0
COMMD4-224ENST00000568877 GABRA1P14867 456 aa15.07■□□□□ 0
COMMD4-224ENST00000568877 SHC1P29353 583 aa15.07■□□□□ 0
COMMD4-224ENST00000568877 CASP6P55212 293 aa15.07■□□□□ 0
COMMD4-224ENST00000568877 CDH12P55289 794 aa15.07■□□□□ 0
COMMD4-224ENST00000568877 TPD52P55327 224 aaPredicted RBP15.07■□□□□ 0
COMMD4-224ENST00000568877 TAS2R41P59536 307 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms