RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 TRMT61AQ96FX7 289 aaKnown RBP7.07□□□□□ -1.28
ATXN3-250ENST00000568290 C16orf58Q96GQ5 468 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 C10orf90Q96M02 699 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 DMRTB1Q96MA1 342 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 LGR4Q9BXB1 951 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 CACNG6Q9BXT2 260 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 DPH1Q9BZG8 443 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 SPRTNQ9H040 489 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-250ENST00000568290 TMEM168Q9H0V1 697 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 MIR1-1HGQ9H1L0 117 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 KLHL31Q9H511 634 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 XKR8Q9H6D3 395 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 C12orf10Q9HB07 376 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 ADAP2Q9NPF8 381 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 NRIP3Q9NQ35 241 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 CTPS2Q9NRF8 586 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 UPB1Q9UBR1 384 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 APOBEC3BQ9UH17 382 aaKnown RBP7.07□□□□□ -1.28
ATXN3-250ENST00000568290 SCP2D1Q9UJQ7 156 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 SLC6A14Q9UN76 642 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 SIGLEC7Q9Y286 467 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 ZNF337Q9Y3M9 751 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 CSNK1G3Q9Y6M4 447 aa7.07□□□□□ -1.28
ATXN3-250ENST00000568290 NUP214P35658 2090 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-250ENST00000568290 A0A0B4J2E0 115 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 A0A1B0GX12 115 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 UBE2QL1A1L167 161 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 CD8B2A6NJW9 211 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 CPNE3O75131 537 aaKnown RBP7.06□□□□□ -1.28
ATXN3-250ENST00000568290 EPPINO95925 133 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 TGM6O95932 706 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 CSF2P04141 144 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 TCRBP04435 133 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 HIST1H2ABP04908 130 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 H2AFB2P0C5Z0 115 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 CD8BP10966 210 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 RNH1P13489 461 aaKnown RBP7.06□□□□□ -1.28
ATXN3-250ENST00000568290 HPGDP15428 266 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 ELK1P19419 428 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 TRHRP34981 398 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-250ENST00000568290 RPL4P36578 427 aaKnown RBP7.06□□□□□ -1.28
ATXN3-250ENST00000568290 MNDAP41218 407 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 ACTR1BP42025 376 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 RABIFP47224 123 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 SLC6A8P48029 635 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 VEGFBP49765 207 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 DGKEP52429 567 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 ZNF136P52737 540 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 NKX2-5P52952 324 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-250ENST00000568290 ACTR1AP61163 376 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 SIRPAP78324 504 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 MRPS21P82921 87 aaKnown RBP7.06□□□□□ -1.28
ATXN3-250ENST00000568290 IKZF1Q13422 519 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 GPR176Q14439 515 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 DUSP5Q16690 384 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 ESCO2Q56NI9 601 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 EOGTQ5NDL2 527 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 ELFN2Q5R3F8 820 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 DMKNQ6E0U4 476 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-250ENST00000568290 FAM180BQ6P0A1 224 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 FBXO46Q6PJ61 603 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-250ENST00000568290 ENPP7Q6UWV6 458 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 KIAA1324Q6UXG2 1013 aaKnown RBP7.06□□□□□ -1.28
ATXN3-250ENST00000568290 HIST3H2AQ7L7L0 130 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 BCDIN3DQ7Z5W3 292 aaKnown RBP7.06□□□□□ -1.28
ATXN3-250ENST00000568290 CCDC28AQ8IWP9 274 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 SDR16C5Q8N3Y7 309 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 OR7G2Q8NG99 324 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 OR14A16Q8NHC5 309 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 MOSPD2Q8NHP6 518 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 FCAMRQ8WWV6 532 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 MYLIPQ8WY64 445 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 THAP4Q8WY91 577 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 HIST1H2ACQ93077 130 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 UCN3Q969E3 161 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 SIPA1Q96FS4 1042 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 MSANTD3Q96H12 275 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 C4orf36Q96KX1 117 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 OR2A5Q96R48 311 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 GPA33Q99795 319 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 GABRG3Q99928 467 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 SEMA4CQ9C0C4 833 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 MKRN2Q9H000 416 aaKnown RBP7.06□□□□□ -1.28
ATXN3-250ENST00000568290 COMMD4Q9H0A8 199 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 TSPAN10Q9H1Z9 355 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-250ENST00000568290 OR51V1Q9H2C8 321 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 OR51J1Q9H342 316 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 ZCCHC4Q9H5U6 513 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 MBNL1Q9NR56 388 aaKnown RBP7.06□□□□□ -1.28
ATXN3-250ENST00000568290 TM7SF3Q9NS93 570 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 CLDND1Q9NY35 253 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 KCMF1Q9P0J7 381 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 KLHL9Q9P2J3 617 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 ZNF223Q9UK11 482 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-250ENST00000568290 ZNF222Q9UK12 451 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 RASD1Q9Y272 281 aa7.06□□□□□ -1.28
ATXN3-250ENST00000568290 ALPK3Q96L96 1907 aa7.05□□□□□ -1.28
ATXN3-250ENST00000568290 TRBV2A0A0J9YWF9 115 aa7.05□□□□□ -1.28
ATXN3-250ENST00000568290 TEX13CA0A0J9YWL9 993 aa7.05□□□□□ -1.28
ATXN3-250ENST00000568290 OR52A4PA6NMU1 304 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms