RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 ZNF300Q96RE9 604 aaPredicted RBP5.69□□□□□ -1.5
TCF4-228ENST00000565393 SORT1Q99523 831 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 PSD2Q9BQI7 771 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 INPP5KQ9BT40 448 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 GSX2Q9BZM3 304 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 ZNF350Q9GZX5 532 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 WDR55Q9H6Y2 383 aaPredicted RBP5.69□□□□□ -1.5
TCF4-228ENST00000565393 MEAF6Q9HAF1 191 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 BCO1Q9HAY6 547 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 THAP1Q9NVV9 213 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 CISD1Q9NZ45 108 aaKnown RBP5.69□□□□□ -1.5
TCF4-228ENST00000565393 CHRNA9Q9UGM1 479 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 BTNL2Q9UIR0 455 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 ZNF232Q9UNY5 417 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 LIPT1Q9Y234 373 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 NOSIPQ9Y314 301 aaKnown RBP5.69□□□□□ -1.5
TCF4-228ENST00000565393 RNF115Q9Y4L5 304 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 NINQ8N4C6 2090 aa5.69□□□□□ -1.5
TCF4-228ENST00000565393 ZNF407Q9C0G0 2248 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 NBPF19A0A087WUL8 3843 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 PRRC2CQ9Y520 2896 aaKnown RBP5.68□□□□□ -1.5
TCF4-228ENST00000565393 ITPR2Q14571 2701 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 A0A1W2PP18 115 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 TMEM120BA0PK00 339 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 DPRXA6NFQ7 191 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 TRPC5OSA6NMA1 111 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 SLCO1B7G3V0H7 640 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 HMGN4O00479 90 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 RFXANKO14593 260 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 GPR171O14626 319 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 HDAC3O15379 428 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 DNAJA2O60884 412 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 RAMP1O60894 148 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 BCAS1O75363 584 aaPredicted RBP5.68□□□□□ -1.5
TCF4-228ENST00000565393 SLC22A3O75751 556 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 ANP32DO95626 131 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 KRT75O95678 551 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 C1QCP02747 245 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 IL6P05231 212 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 PGRP06401 933 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 HEXAP06865 529 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 GUSBP08236 651 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 DHRS4L1P0CG22 281 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 NID1P14543 1247 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 UQCRBP14927 111 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 GGT1P19440 569 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 PTNP21246 168 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 IGHV1-2P23083 117 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 PCSK6P29122 969 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 TACR3P29371 465 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 IDUAP35475 653 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 CRATP43155 626 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 HTR3AP46098 478 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 CLK1P49759 484 aaKnown RBP5.68□□□□□ -1.5
TCF4-228ENST00000565393 ZNF83P51522 516 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 PPP2R2BQ00005 443 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 BSPH1Q075Z2 132 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 LRRC74AQ0VAA2 488 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 PPA1Q15181 289 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 SYPL1Q16563 259 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 ZNF672Q499Z4 452 aaPredicted RBP5.68□□□□□ -1.5
TCF4-228ENST00000565393 SYT14P1Q58G82 188 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 FBXW9Q5XUX1 488 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 ATG16L1Q676U5 607 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 GRINAQ7Z429 371 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 P2RY8Q86VZ1 359 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 CCDC103Q8IW40 242 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 PEX5LQ8IYB4 626 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 LRRC34Q8IZ02 419 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 DEPDC4Q8N2C3 294 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 PIAS4Q8N2W9 510 aaPredicted RBP5.68□□□□□ -1.5
TCF4-228ENST00000565393 LILRB1Q8NHL6 650 aaPredicted RBP5.68□□□□□ -1.5
TCF4-228ENST00000565393 SLC25A43Q8WUT9 341 aaPredicted RBP5.68□□□□□ -1.5
TCF4-228ENST00000565393 CNOT9Q92600 299 aaKnown RBP5.68□□□□□ -1.5
TCF4-228ENST00000565393 PMM1Q92871 262 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 NEUROG1Q92886 237 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 FBXW5Q969U6 566 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 APH1AQ96BI3 265 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 DDIT4LQ96D03 193 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 ARL5BQ96KC2 179 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 CCDC115Q96NT0 180 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 TRNT1Q96Q11 434 aaKnown RBP5.68□□□□□ -1.5
TCF4-228ENST00000565393 TMEM204Q9BSN7 226 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 NAA11Q9BSU3 229 aaPredicted RBP5.68□□□□□ -1.5
TCF4-228ENST00000565393 CCDC106Q9BWC9 280 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 C1QTNF6Q9BXI9 259 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 OR11A1Q9GZK7 315 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 SAP130Q9H0E3 1048 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 ALG2Q9H553 416 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 MANSC1Q9H8J5 431 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 COQ10BQ9H8M1 238 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 CACYBPQ9HB71 228 aaKnown RBP5.68□□□□□ -1.5
TCF4-228ENST00000565393 PARPBPQ9NWS1 579 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 ASB6Q9NWX5 421 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 NKIRAS1Q9NYS0 192 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 EMC3Q9P0I2 261 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 TMEM181Q9P2C4 612 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 UPB1Q9UBR1 384 aa5.68□□□□□ -1.5
TCF4-228ENST00000565393 ING1Q9UK53 422 aaPredicted RBP5.68□□□□□ -1.5
TCF4-228ENST00000565393 POU2F3Q9UKI9 436 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms