RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 RAET1LQ5VY80 246 aa23.44■■□□□ 1.34
NME3-208ENST00000565379 WBP2NLQ6ICG8 309 aa23.44■■□□□ 1.34
NME3-208ENST00000565379 LCN8Q6JVE9 175 aa23.44■■□□□ 1.34
NME3-208ENST00000565379 GRINAQ7Z429 371 aa23.44■■□□□ 1.34
NME3-208ENST00000565379 MARVELD3Q96A59 401 aa23.44■■□□□ 1.34
NME3-208ENST00000565379 SARAFQ96BY9 339 aa23.44■■□□□ 1.34
NME3-208ENST00000565379 SFXN2Q96NB2 322 aa23.44■■□□□ 1.34
NME3-208ENST00000565379 ZNF559Q9BR84 538 aa23.44■■□□□ 1.34
NME3-208ENST00000565379 TRIM2Q9C040 744 aa23.44■■□□□ 1.34
NME3-208ENST00000565379 SH3GLB1Q9Y371 365 aa23.44■■□□□ 1.34
NME3-208ENST00000565379 NCOA6Q14686 2063 aaPredicted RBP23.44■■□□□ 1.34
NME3-208ENST00000565379 FBN2P35556 2912 aa23.43■■□□□ 1.34
NME3-208ENST00000565379 FKBP2P26885 142 aaKnown RBP23.43■■□□□ 1.34
NME3-208ENST00000565379 SLC1A3P43003 542 aa23.43■■□□□ 1.34
NME3-208ENST00000565379 MAP2K6P52564 334 aa23.43■■□□□ 1.34
NME3-208ENST00000565379 GFRA1P56159 465 aa23.43■■□□□ 1.34
NME3-208ENST00000565379 SESN3P58005 492 aa23.43■■□□□ 1.34
NME3-208ENST00000565379 IFI44LQ53G44 452 aa23.43■■□□□ 1.34
NME3-208ENST00000565379 ENPP6Q6UWR7 440 aa23.43■■□□□ 1.34
NME3-208ENST00000565379 Q6ZPB1 254 aaPredicted RBP23.43■■□□□ 1.34
NME3-208ENST00000565379 MRGPRGQ86SM5 289 aa23.43■■□□□ 1.34
NME3-208ENST00000565379 LSMEM1Q8N8F7 131 aa23.43■■□□□ 1.34
NME3-208ENST00000565379 GEMIN6Q8WXD5 167 aaKnown RBP23.43■■□□□ 1.34
NME3-208ENST00000565379 CCDC124Q96CT7 223 aaKnown RBP23.43■■□□□ 1.34
NME3-208ENST00000565379 LRGUKQ96M69 825 aa23.43■■□□□ 1.34
NME3-208ENST00000565379 POLR2J2Q9GZM3 115 aaKnown RBP23.43■■□□□ 1.34
NME3-208ENST00000565379 POLR2J3Q9H1A7 115 aaKnown RBP23.43■■□□□ 1.34
NME3-208ENST00000565379 SLC6A15Q9H2J7 730 aa23.43■■□□□ 1.34
NME3-208ENST00000565379 RPH3AQ9Y2J0 694 aaPredicted RBP23.43■■□□□ 1.34
NME3-208ENST00000565379 PKDREJQ9NTG1 2253 aa23.42■■□□□ 1.34
NME3-208ENST00000565379 TMEM229AB2RXF0 380 aa23.42■■□□□ 1.34
NME3-208ENST00000565379 AP3D1O14617 1153 aa23.42■■□□□ 1.34
NME3-208ENST00000565379 ADAM11O75078 769 aa23.42■■□□□ 1.34
NME3-208ENST00000565379 NTN1O95631 604 aa23.42■■□□□ 1.34
NME3-208ENST00000565379 PRF1P14222 555 aa23.42■■□□□ 1.34
NME3-208ENST00000565379 APOBEC1P41238 236 aaKnown RBP23.42■■□□□ 1.34
NME3-208ENST00000565379 ZNF136P52737 540 aa23.42■■□□□ 1.34
NME3-208ENST00000565379 TOMM34Q15785 309 aaPredicted RBP23.42■■□□□ 1.34
NME3-208ENST00000565379 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.42■■□□□ 1.34
NME3-208ENST00000565379 FKBP9P1Q75LS8 142 aa23.42■■□□□ 1.34
NME3-208ENST00000565379 COMTD1Q86VU5 262 aa23.42■■□□□ 1.34
NME3-208ENST00000565379 ABTB1Q969K4 478 aaPredicted RBP23.42■■□□□ 1.34
NME3-208ENST00000565379 TMEM27Q9HBJ8 222 aa23.42■■□□□ 1.34
NME3-208ENST00000565379 SERINC1Q9NRX5 453 aa23.42■■□□□ 1.34
NME3-208ENST00000565379 AP4B1Q9Y6B7 739 aa23.42■■□□□ 1.34
NME3-208ENST00000565379 OR2M5A3KFT3 312 aa23.41■■□□□ 1.34
NME3-208ENST00000565379 ACOT8O14734 319 aa23.41■■□□□ 1.34
NME3-208ENST00000565379 BCKDKO14874 412 aa23.41■■□□□ 1.34
NME3-208ENST00000565379 B3GALT5-AS1P59052 145 aa23.41■■□□□ 1.34
NME3-208ENST00000565379 MS4A2Q01362 244 aa23.41■■□□□ 1.34
NME3-208ENST00000565379 FOXF1Q12946 379 aa23.41■■□□□ 1.34
NME3-208ENST00000565379 BCL2A1Q16548 175 aa23.41■■□□□ 1.34
NME3-208ENST00000565379 CARM1Q86X55 608 aa23.41■■□□□ 1.34
NME3-208ENST00000565379 DNAJA4Q8WW22 397 aaPredicted RBP23.41■■□□□ 1.34
NME3-208ENST00000565379 HSH2DQ96JZ2 352 aa23.41■■□□□ 1.34
NME3-208ENST00000565379 RPS6KB2Q9UBS0 482 aa23.41■■□□□ 1.34
NME3-208ENST00000565379 LIPGQ9Y5X9 500 aa23.41■■□□□ 1.34
NME3-208ENST00000565379 APCP25054 2843 aa23.41■■□□□ 1.34
NME3-208ENST00000565379 A0A1B0GTH9 108 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 M0R3H8 397 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 FRS3O43559 492 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 PEPDP12955 493 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 PRG2P13727 222 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 ABOP16442 354 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 HOXB6P17509 224 aaKnown RBP23.4■■□□□ 1.34
NME3-208ENST00000565379 PSMA4P25789 261 aaKnown RBP23.4■■□□□ 1.34
NME3-208ENST00000565379 POLR2HP52434 150 aaKnown RBP23.4■■□□□ 1.34
NME3-208ENST00000565379 ZSCAN26Q16670 478 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 VASNQ6EMK4 673 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 PLEKHM3Q6ZWE6 761 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 DOLPP1Q86YN1 238 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 OR6T1Q8NGN1 323 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 POC1BQ8TC44 478 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 PYURFQ96I23 114 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 MCHR1Q99705 422 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 KLHDC3Q9BQ90 382 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 ADAM19Q9H013 955 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 C12orf10Q9HB07 376 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 SLC7A8Q9UHI5 535 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 SLC6A5Q9Y345 797 aa23.4■■□□□ 1.34
NME3-208ENST00000565379 SPIN1Q9Y657 262 aaPredicted RBP23.4■■□□□ 1.34
NME3-208ENST00000565379 ADGRG4Q8IZF6 3080 aa23.39■■□□□ 1.34
NME3-208ENST00000565379 DNAJC13O75165 2243 aa23.39■■□□□ 1.34
NME3-208ENST00000565379 CACNA1CQ13936 2221 aa23.39■■□□□ 1.34
NME3-208ENST00000565379 AQP12BA6NM10 295 aa23.39■■□□□ 1.33
NME3-208ENST00000565379 GJE1A6NN92 205 aa23.39■■□□□ 1.33
NME3-208ENST00000565379 IFNW1P05000 195 aa23.39■■□□□ 1.33
NME3-208ENST00000565379 BMP7P18075 431 aa23.39■■□□□ 1.33
NME3-208ENST00000565379 PTGS2P35354 604 aa23.39■■□□□ 1.33
NME3-208ENST00000565379 CASP6P55212 293 aa23.39■■□□□ 1.33
NME3-208ENST00000565379 RAC1P63000 192 aa23.39■■□□□ 1.33
NME3-208ENST00000565379 MERTKQ12866 999 aa23.39■■□□□ 1.33
NME3-208ENST00000565379 SELENBP1Q13228 472 aa23.39■■□□□ 1.33
NME3-208ENST00000565379 SWT1Q5T5J6 900 aaKnown RBP23.39■■□□□ 1.33
NME3-208ENST00000565379 ZNF613Q6PF04 617 aa23.39■■□□□ 1.33
NME3-208ENST00000565379 AQP12AQ8IXF9 295 aa23.39■■□□□ 1.33
NME3-208ENST00000565379 PM20D2Q8IYS1 436 aa23.39■■□□□ 1.33
NME3-208ENST00000565379 CADM2Q8N3J6 435 aa23.39■■□□□ 1.33
NME3-208ENST00000565379 VANGL1Q8TAA9 524 aaPredicted RBP23.39■■□□□ 1.33
NME3-208ENST00000565379 SELENONQ9NZV5 590 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms