RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 C20orf27Q9GZN8 174 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 ZNF350Q9GZX5 532 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 SAP130Q9H0E3 1048 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 ACER3Q9NUN7 267 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 ASIC5Q9NY37 505 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 CISD1Q9NZ45 108 aaKnown RBP7.58□□□□□ -1.2
CAPN3-213ENST00000565173 GDF2Q9UK05 429 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-213ENST00000565173 MKLN1Q9UL63 735 aa7.58□□□□□ -1.2
CAPN3-213ENST00000565173 CR1P17927 2039 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 A0A096LNT2 108 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 A0A1W2PP18 115 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 PRAMEF27A3QJZ7 478 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 OR5H1A6NKK0 313 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 DUXAA6NLW8 204 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 RNASET2O00584 256 aaKnown RBP7.57□□□□□ -1.2
CAPN3-213ENST00000565173 ANKRD28O15084 1053 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 ADAM11O75078 769 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 STX11O75558 287 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 AK1P00568 194 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 CSTAP01040 98 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 C1QCP02747 245 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 FESP07332 822 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 CCR4P51679 360 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 H3F3AP84243 136 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 DMTNQ08495 405 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 FUT5Q11128 374 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 MERTKQ12866 999 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 FAPQ12884 760 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 VEZF1Q14119 521 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 PDK3Q15120 406 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 PPA1Q15181 289 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 STK11Q15831 433 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 SMU1Q2TAY7 513 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 SYT14P1Q58G82 188 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 ABLIM2Q6H8Q1 611 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 TYW3Q6IPR3 259 aaKnown RBP7.57□□□□□ -1.2
CAPN3-213ENST00000565173 BHLHB9Q6PI77 547 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 EIF3MQ7L2H7 374 aaKnown RBP7.57□□□□□ -1.2
CAPN3-213ENST00000565173 GALNT5Q7Z7M9 940 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 MTDHQ86UE4 582 aaKnown RBP7.57□□□□□ -1.2
CAPN3-213ENST00000565173 P2RY8Q86VZ1 359 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 LSRQ86X29 649 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-213ENST00000565173 ADGRG3Q86Y34 549 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 TMCO5AQ8N6Q1 288 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 SPATA3Q8NHX4 192 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 AENQ8WTP8 325 aaKnown RBP7.57□□□□□ -1.2
CAPN3-213ENST00000565173 GTPBP3Q969Y2 492 aaKnown RBP7.57□□□□□ -1.2
CAPN3-213ENST00000565173 TUBGCP3Q96CW5 907 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 ARL5BQ96KC2 179 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 ROPN1BQ9BZX4 212 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-213ENST00000565173 OR51I1Q9H343 314 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 AKTIPQ9H8T0 292 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 ROPN1Q9HAT0 212 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-213ENST00000565173 SERINC1Q9NRX5 453 aa7.57□□□□□ -1.2
CAPN3-213ENST00000565173 NOP53Q9NZM5 478 aaKnown RBP7.57□□□□□ -1.2
CAPN3-213ENST00000565173 CHD3Q12873 2000 aaKnown RBP7.56□□□□□ -1.2
CAPN3-213ENST00000565173 ABCA1O95477 2261 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 RNF103-CHMP3A0A140T963 221 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 PRSS51A0A1B0GVH4 220 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 CLDN24A6NM45 220 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 E7EQL1 145 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 SULT2B1O00204 365 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 ABCD4O14678 606 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 KIAA0513O60268 411 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 CYP7B1O75881 506 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 PMS2P2O95744 297 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 UBTFL6P0CB48 400 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-213ENST00000565173 OR12D1P0DN82 309 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 GGT1P19440 569 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 PGCP20142 388 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 PTNP21246 168 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 SOAT1P35610 550 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 APOBEC1P41238 236 aaKnown RBP7.56□□□□□ -1.2
CAPN3-213ENST00000565173 FOXG1P55316 489 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-213ENST00000565173 CSNK2A1P68400 391 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-213ENST00000565173 IRX1P78414 480 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-213ENST00000565173 MAD2L1Q13257 205 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-213ENST00000565173 CASP8Q14790 479 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 FBXW9Q5XUX1 488 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 SAXO2Q658L1 398 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 C11orf71Q6IPW1 123 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 EMBQ6PCB8 327 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 ZNF100Q8IYN0 542 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 ZNF781Q8N8C0 355 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 OR10H5Q8NGA6 315 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 OR4A15Q8NGL6 344 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 SLC25A43Q8WUT9 341 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-213ENST00000565173 XAGE5Q8WWM1 108 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 OIT3Q8WWZ8 545 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 TMEM234Q8WY98 164 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 RAB8BQ92930 207 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 ARL8AQ96BM9 186 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 MUCL1Q96DR8 90 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 SLC35G5Q96KT7 338 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 MUS81Q96NY9 551 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 CTPS2Q9NRF8 586 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 RAB21Q9UL25 225 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 B3GALT5Q9Y2C3 310 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 SLC25A15Q9Y619 301 aa7.56□□□□□ -1.2
CAPN3-213ENST00000565173 RTTNQ86VV8 2226 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms