RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 SUPT7LO94864 414 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 NUDT7P0C024 238 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 HMOX2P30519 316 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 GPC1P35052 558 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 DIO1P49895 249 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 SLC16A1P53985 500 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 PRKAG1P54619 331 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 SKP2Q13309 424 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 RIN1Q13671 783 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 PDK3Q15120 406 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 MSMPQ1L6U9 139 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 TSNAXIP1Q2TAA8 658 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 C9orf135Q5VTT2 229 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 NOXRED1Q6NXP6 359 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 RINLQ6ZS11 566 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 IKBIPQ70UQ0 350 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 SSX8Q7RTT4 187 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 HDXQ7Z353 690 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 ZCCHC24Q8N2G6 241 aaKnown RBP9.01□□□□□ -0.97
SF3B3-204ENST00000563739 OR2T11Q8NH01 316 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 SGMS2Q8NHU3 365 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 PHOSPHO1Q8TCT1 267 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 FAM120BQ96EK7 910 aaKnown RBP9.01□□□□□ -0.97
SF3B3-204ENST00000563739 L3HYPDHQ96EM0 354 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 DNAJA3Q96EY1 480 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 REXO5Q96IC2 774 aaKnown RBP9.01□□□□□ -0.97
SF3B3-204ENST00000563739 ARL5BQ96KC2 179 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 NELFAQ9H3P2 528 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 PLK3Q9H4B4 646 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 ESM1Q9NQ30 184 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 TIGARQ9NQ88 270 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 MIEF1Q9NQG6 463 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 SLC7A10Q9NS82 523 aa9.01□□□□□ -0.97
SF3B3-204ENST00000563739 PSMC3IPQ9P2W1 217 aaPredicted RBP9.01□□□□□ -0.97
SF3B3-204ENST00000563739 TMEM129A0AVI4 362 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 TRIM49D1C9J1S8 452 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 FAM157AC9JC47 383 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 SCDO00767 359 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 RGS9O75916 674 aaPredicted RBP9□□□□□ -0.97
SF3B3-204ENST00000563739 AVPP01185 164 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 SHBGP04278 402 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 HMGN2P05204 90 aaKnown RBP9□□□□□ -0.97
SF3B3-204ENST00000563739 ENO1P06733 434 aaKnown RBP9□□□□□ -0.97
SF3B3-204ENST00000563739 SDC1P18827 310 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 PGCP20142 388 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 APEX1P27695 318 aaKnown RBP9□□□□□ -0.97
SF3B3-204ENST00000563739 CALCRP30988 508 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 DVL1P1P54792 670 aaPredicted RBP9□□□□□ -0.97
SF3B3-204ENST00000563739 POU6F2P78424 691 aaPredicted RBP9□□□□□ -0.97
SF3B3-204ENST00000563739 LCP2Q13094 533 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 TIGD2Q4W5G0 525 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 ATP6AP1LQ52LC2 224 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 LCE2DQ5TA82 110 aaPredicted RBP9□□□□□ -0.97
SF3B3-204ENST00000563739 TSPO2Q5TGU0 170 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 CDC73Q6P1J9 531 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 C3orf33Q6P1S2 294 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 KLHL17Q6TDP4 642 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 TMPPEQ6ZT21 453 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 TRIM46Q7Z4K8 759 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 CARM1Q86X55 608 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 CCDC103Q8IW40 242 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 ZNF100Q8IYN0 542 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 COX18Q8N8Q8 333 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 ZMYND19Q96E35 227 aaPredicted RBP9□□□□□ -0.97
SF3B3-204ENST00000563739 BOD1Q96IK1 185 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 OR5B2Q96R09 309 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 SNX18Q96RF0 628 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 TRMOQ9BU70 441 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 BTBD2Q9BX70 525 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 DUSP22Q9NRW4 184 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 GPATCH2Q9NW75 528 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 EMCNQ9ULC0 261 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 FKBP7Q9Y680 259 aa9□□□□□ -0.97
SF3B3-204ENST00000563739 A0A0A6YYJ9 748 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 CIB4A0PJX0 185 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 GJE1A6NN92 205 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 SLCO1B7G3V0H7 640 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 LYNX1G3V0Z9 82 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 WNT9BO14905 357 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 TMPRSS2O15393 492 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 SASH3O75995 380 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 SNRPAP09012 282 aaKnown RBP8.99□□□□□ -0.97
SF3B3-204ENST00000563739 NUDT17P0C025 328 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 LYNX1P0DP58 116 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 IMPDH1P20839 514 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 PRPH2P23942 346 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 SLC7A1P30825 629 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 PPOXP50336 477 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 PRKAA2P54646 552 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 PKNOX1P55347 436 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 HILS1P60008 231 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 H3F3AP84243 136 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 HGFACQ04756 655 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 CHRNB3Q05901 458 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 LGALS3BPQ08380 585 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 LASP1Q14847 261 aaKnown RBP8.99□□□□□ -0.97
SF3B3-204ENST00000563739 EFNB3Q15768 340 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 CARTPTQ16568 116 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 TUSC1Q2TAM9 212 aa8.99□□□□□ -0.97
SF3B3-204ENST00000563739 VPS26BQ4G0F5 336 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms