RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 PSMA4P25789 261 aaKnown RBP16.99■□□□□ 0.31
RAB40C-207ENST00000563109 CASP6P55212 293 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 TAS2R41P59536 307 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 RAC1P63000 192 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 ALG10BQ5I7T1 473 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 ENTPD8Q5MY95 495 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 ZNF613Q6PF04 617 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 ULK3Q6PHR2 472 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 CYP4Z1Q86W10 505 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 RBM45Q8IUH3 476 aaKnown RBP16.99■□□□□ 0.31
RAB40C-207ENST00000563109 FAM57AQ8TBR7 257 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 SLC25A43Q8WUT9 341 aaPredicted RBP16.99■□□□□ 0.31
RAB40C-207ENST00000563109 C3orf49Q96BT1 292 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 ZNF524Q96C55 264 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 SLC47A1Q96FL8 570 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 RAB3IPQ96QF0 476 aaPredicted RBP16.99■□□□□ 0.31
RAB40C-207ENST00000563109 TIMP4Q99727 224 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 WFDC6Q9BQY6 131 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 TMEM185BQ9H7F4 350 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 TNFRSF10DQ9UBN6 386 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 CHRNA9Q9UGM1 479 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 CAMK2AQ9UQM7 478 aa16.99■□□□□ 0.31
RAB40C-207ENST00000563109 ZNF407Q9C0G0 2248 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 TMED7-TICAM2A0A0A6YYA0 188 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 TRAPPC13A5PLN9 417 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 ELOA3DA6NLF2 546 aaPredicted RBP16.98■□□□□ 0.31
RAB40C-207ENST00000563109 AQP12BA6NM10 295 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 H0Y3Z8 333 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 SEC14L5O43304 696 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 SLC19A2O60779 497 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 PNMTP11086 282 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 FKBP2P26885 142 aaKnown RBP16.98■□□□□ 0.31
RAB40C-207ENST00000563109 LHX2P50458 406 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 MAP2K6P52564 334 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 BCL2A1Q16548 175 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 ELOA3BQ3SY89 546 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 DCST1Q5T197 706 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 SWT1Q5T5J6 900 aaKnown RBP16.98■□□□□ 0.31
RAB40C-207ENST00000563109 C1orf146Q5VVC0 180 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 FGD2Q7Z6J4 655 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 SPATA24Q86W54 205 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 AQP12AQ8IXF9 295 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 UBQLNLQ8IYU4 475 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 LILRA2Q8N149 483 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 FAM86B1Q8N7N1 296 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 ATP6V1C2Q8NEY4 427 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 ELOA3Q8NG57 546 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 PRR14Q9BWN1 585 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 ADAM19Q9H013 955 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 C12orf10Q9HB07 376 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 OSGIN1Q9UJX0 560 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 TMED7Q9Y3B3 224 aa16.98■□□□□ 0.31
RAB40C-207ENST00000563109 A0A0B4J2E0 115 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 A0A1B0GX12 115 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 TCRBV5S2A0A599 114 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 FIGNL2A6NMB9 653 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 TPST2O60704 377 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 OR5F1O95221 314 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 ZNF708P17019 499 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 ITGA2P17301 1181 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 CCNA2P20248 432 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 IL11P20809 199 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 SLC7A1P30825 629 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 SFTPDP35247 375 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 STARP49675 285 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 SRYQ05066 204 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 SF3B4Q15427 424 aaKnown RBP eCLIP16.97■□□□□ 0.315e-9■■■■■ 30.3
RAB40C-207ENST00000563109 FAM98BQ52LJ0 330 aaKnown RBP16.97■□□□□ 0.31
RAB40C-207ENST00000563109 PDSS1Q5T2R2 415 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 ZNF605Q86T29 641 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 ATG4DQ86TL0 474 aaPredicted RBP16.97■□□□□ 0.31
RAB40C-207ENST00000563109 CD163Q86VB7 1156 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 CHERPQ8IWX8 916 aaKnown RBP16.97■□□□□ 0.31
RAB40C-207ENST00000563109 OR5M9Q8NGP3 310 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 ADAMTS16Q8TE57 1224 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 DDIT4LQ96D03 193 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 PRRC1Q96M27 445 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 KLHL15Q96M94 604 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 AMBRA1Q9C0C7 1298 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 PRDM14Q9GZV8 571 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 MAGIXQ9H6Y5 334 aa16.97■□□□□ 0.31
RAB40C-207ENST00000563109 FAM32AQ9Y421 112 aaKnown RBP16.97■□□□□ 0.31
RAB40C-207ENST00000563109 SPENQ96T58 3664 aaKnown RBP16.96■□□□□ 0.31
RAB40C-207ENST00000563109 DNAJC13O75165 2243 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 ZNHIT1O43257 154 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 CHP2O43745 196 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 FABP3P05413 133 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 TFPIP10646 304 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 CPN1P15169 458 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 CLDN18P56856 261 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 RPS3AP61247 264 aaKnown RBP16.96■□□□□ 0.31
RAB40C-207ENST00000563109 CHRNB3Q05901 458 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 MRPL49Q13405 166 aaKnown RBP16.96■□□□□ 0.31
RAB40C-207ENST00000563109 IGFBP7Q16270 282 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 C3AR1Q16581 482 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 ZNF585AQ6P3V2 769 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 ESPNLQ6ZVH7 1005 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 CHMP1BQ7LBR1 199 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 ADGRG3Q86Y34 549 aa16.96■□□□□ 0.31
RAB40C-207ENST00000563109 PHF10Q8WUB8 498 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms