RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 OR2T11Q8NH01 316 aa13.86□□□□□ -0.19
HERPUD1-205ENST00000562914 OR52N5Q8NH56 324 aa13.86□□□□□ -0.19
HERPUD1-205ENST00000562914 CLHC1Q8NHS4 586 aa13.86□□□□□ -0.19
HERPUD1-205ENST00000562914 RFWD2Q8NHY2 731 aa13.86□□□□□ -0.19
HERPUD1-205ENST00000562914 MUS81Q96NY9 551 aa13.86□□□□□ -0.19
HERPUD1-205ENST00000562914 PRPF18Q99633 342 aaKnown RBP13.86□□□□□ -0.19
HERPUD1-205ENST00000562914 ANKZF1Q9H8Y5 726 aa13.86□□□□□ -0.19
HERPUD1-205ENST00000562914 GPATCH2Q9NW75 528 aa13.86□□□□□ -0.19
HERPUD1-205ENST00000562914 KCNS2Q9ULS6 477 aa13.86□□□□□ -0.19
HERPUD1-205ENST00000562914 NPIPA5A0A0B4J1W7 369 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 SERINC4A6NH21 518 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 NPIPA7E9PJI5 369 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 HAX1O00165 279 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 ANKRD28O15084 1053 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 H6PDO95479 791 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 FGF4P08620 206 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 NPIPA8P0DM63 369 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 PTNP21246 168 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 APOBEC3AP31941 199 aaPredicted RBP13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 APOBEC1P41238 236 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 CLK1P49759 484 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 ZNF83P51522 516 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 SLC16A1P53985 500 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 SKP2Q13309 424 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 KANK2Q63ZY3 851 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 CCDC63Q8NA47 563 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 NOA1Q8NC60 698 aaKnown RBP13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 C1orf162Q8NEQ5 155 aaPredicted RBP13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 PIGXQ8TBF5 258 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 PPP3R2Q96LZ3 170 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 SDF2Q99470 211 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 C19orf24Q9BVV8 132 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 TUBB1Q9H4B7 451 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 MANSC1Q9H8J5 431 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 MYOZ1Q9NP98 299 aaPredicted RBP13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 TBK1Q9UHD2 729 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 DNAJC15Q9Y5T4 150 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 PTGDR2Q9Y5Y4 395 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 FKBP7Q9Y680 259 aa13.85□□□□□ -0.19
HERPUD1-205ENST00000562914 ZNF716A6NP11 495 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 C9JVG2 144 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 MRPL33O75394 65 aaKnown RBP13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 PMS2P2O95744 297 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 LINC00032P0C843 101 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 ZNF16P17020 682 aaPredicted RBP13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 EDNRAP25101 427 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 SESN3P58005 492 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 CHRNEQ04844 493 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 MERTKQ12866 999 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 SQLEQ14534 574 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 ZNF141Q15928 474 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 GABRA6Q16445 453 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 NDUFAF6Q330K2 333 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 GALNTL6Q49A17 601 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 PDZK1Q5T2W1 519 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 LIPNQ5VXI9 398 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 EIF3MQ7L2H7 374 aaKnown RBP13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 ZNF775Q96BV0 537 aaPredicted RBP13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 THUMPD3Q9BV44 507 aaKnown RBP13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 PPCSQ9HAB8 311 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 ACER3Q9NUN7 267 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 PARPBPQ9NWS1 579 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 DCTN4Q9UJW0 460 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 AMDHD2Q9Y303 409 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 HDGFL3Q9Y3E1 203 aa13.84□□□□□ -0.19
HERPUD1-205ENST00000562914 NBEAL1Q6ZS30 2694 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 A0A1W2PPM1 405 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 M0R1B8 84 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 STX11O75558 287 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 CSTAP01040 98 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 GUSBP08236 651 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 LAMP1P11279 417 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 EFNA1P20827 205 aaPredicted RBP13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 PAX7P23759 505 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 MAGEA8P43361 318 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 PDLIM4P50479 330 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 TGFBR3Q03167 851 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 B3GLCTQ6Y288 498 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 DDIASQ8IXT1 998 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 IFT20Q8IY31 132 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 OR7A2PQ8NGA2 310 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 ZNF524Q96C55 264 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 COQ8BQ96D53 544 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 OR7D2Q96RA2 312 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 BHLHE41Q9C0J9 482 aaPredicted RBP13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 QRSL1Q9H0R6 528 aaKnown RBP13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 EML4Q9HC35 981 aaKnown RBP13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 FIS1Q9Y3D6 152 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 KCNE3Q9Y6H6 103 aa13.83□□□□□ -0.2
HERPUD1-205ENST00000562914 COPEO14579 308 aa13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 TRIM13O60858 407 aa13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 AGR2O95994 175 aa13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 IGHV3-9P01782 118 aa13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 TFPIP10646 304 aa13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 PRPS1L1P21108 318 aa13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 IGFBP5P24593 272 aa13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 PHC1P78364 1004 aa13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 SPOCK1Q08629 439 aa13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 C17orf53Q8N3J3 647 aaPredicted RBP13.82□□□□□ -0.2
HERPUD1-205ENST00000562914 ZNF540Q8NDQ6 660 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms