RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 AKAP7Q9P0M2 348 aaPredicted RBP13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 OPN4Q9UHM6 478 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 RUVBL1Q9Y265 456 aaKnown RBP13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 TMEM218A2RU14 115 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 GFYI3L273 518 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 ZNF197O14709 1029 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 KLK3P07288 261 aaPredicted RBP13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 ANXA4P09525 319 aaPredicted RBP13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 ACHEP22303 614 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 WASP42768 502 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 STARP49675 285 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 PFN3P60673 137 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 NAE1Q13564 534 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 KIAA1161Q6NSJ0 714 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 OR5M1Q8NGP8 315 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 OR6K3Q8NGY3 331 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 PNPLA2Q96AD5 504 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 TMEM159Q96B96 161 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 NOX3Q9HBY0 568 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 CTPS2Q9NRF8 586 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 RASL12Q9NYN1 266 aa13.02□□□□□ -0.33
GTF3C1-203ENST00000562609 LRRK1Q38SD2 2015 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 MGAT4DA6NG13 374 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 NPIPB8E9PQR5 432 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 SPINT1O43278 529 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 C8GP07360 202 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 CD22P20273 847 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 CCR8P51685 355 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 PRR5P85299 388 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 PDZK1IP1Q13113 114 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 ZNF385BQ569K4 471 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 ACER2Q5QJU3 275 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 ZDHHC20Q5W0Z9 365 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 OR6V1Q8N148 313 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 TRAM1L1Q8N609 369 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 OR4D9Q8NGE8 314 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 GCDHQ92947 438 aaPredicted RBP13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 ARRDC3Q96B67 414 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 ORAI1Q96D31 301 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 OTUB2Q96DC9 234 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 NRTNQ99748 197 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 PBX4Q9BYU1 374 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 PLA2G12AQ9BZM1 189 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 MFFQ9GZY8 342 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 OR2AG1Q9H205 316 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 GULP1Q9UBP9 304 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 E7EQ34 232 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 SLC16A8O95907 504 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 ADH1CP00326 375 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 F12P00748 615 aaPredicted RBP13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 GP1BAP07359 652 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 FBP1P09467 338 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 SPI1P17947 270 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 ADCYAP1P18509 176 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 MMP11P24347 488 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 MPGP29372 298 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 ATP6V1E1P36543 226 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 SLC6A12P48065 614 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 CDH11P55287 796 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 SHC2P98077 582 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 CDK5Q00535 292 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 SMCO1Q147U7 214 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 C9orf152Q5JTZ5 239 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 FAM69AQ5T7M9 428 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 PGAP1Q75T13 922 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 OR52B4Q8NGK2 314 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 EXOSC8Q96B26 276 aaKnown RBP13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 GPA33Q99795 319 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 EGLN3Q9H6Z9 239 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 ISG20L2Q9H9L3 353 aaKnown RBP13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 DEC1Q9P2X7 70 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 SIRT4Q9Y6E7 314 aaPredicted RBP13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 VCANP13611 3396 aa13.01□□□□□ -0.33
GTF3C1-203ENST00000562609 C2orf16Q68DN1 1984 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 TBC1D3BA6NDS4 549 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 POM121BA6NF01 834 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 ZNF35P13682 527 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 SNRPBP14678 240 aaKnown RBP13□□□□□ -0.33
GTF3C1-203ENST00000562609 H2BFSP57053 126 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 RAB5BP61020 215 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 DCDP81605 110 aaKnown RBP13□□□□□ -0.33
GTF3C1-203ENST00000562609 ECH1Q13011 328 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 PLEKHS1Q5SXH7 462 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 ZNF626Q68DY1 528 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 FCRLBQ6BAA4 426 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 DPPA4Q7L190 304 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 TRAPPC5Q8IUR0 188 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 CFAP206Q8IYR0 622 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 C2orf73Q8N5S3 287 aaPredicted RBP13□□□□□ -0.33
GTF3C1-203ENST00000562609 TBC1D19Q8N5T2 526 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 ZNF565Q8N9K5 539 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 FAM98AQ8NCA5 519 aaKnown RBP13□□□□□ -0.33
GTF3C1-203ENST00000562609 HAVCR2Q8TDQ0 301 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 APOBEC4Q8WW27 367 aaKnown RBP13□□□□□ -0.33
GTF3C1-203ENST00000562609 SPSB2Q99619 263 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 ORAI3Q9BRQ5 295 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 GPN1Q9HCN4 374 aaPredicted RBP13□□□□□ -0.33
GTF3C1-203ENST00000562609 BRWD1Q9NSI6 2320 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 A0A0G2JK05 382 aa13□□□□□ -0.33
GTF3C1-203ENST00000562609 GNG14A0A1W2PPG7 69 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms