RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 MEX3DQ86XN8 651 aaKnown RBP5.99□□□□□ -1.45
CAPN3-210ENST00000561817 PRSS58Q8IYP2 241 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 CLDN22Q8N7P3 220 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 APCDD1LQ8NCL9 501 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 AGBL5Q8NDL9 886 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 C17orf47Q8NEP4 570 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 BPIFB6Q8NFQ5 453 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 OR13F1Q8NGS4 319 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 WDR36Q8NI36 951 aaKnown RBP5.99□□□□□ -1.45
CAPN3-210ENST00000561817 FAM81AQ8TBF8 368 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 GNPDA2Q8TDQ7 276 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 TMEM255BQ8WV15 326 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 RNF138Q8WVD3 245 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 DAZLQ92904 295 aaKnown RBP5.99□□□□□ -1.45
CAPN3-210ENST00000561817 MUL1Q969V5 352 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 TP53INP1Q96A56 240 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 ARSGQ96EG1 525 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 TAAR9Q96RI9 348 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 CDC6Q99741 560 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 KLHDC3Q9BQ90 382 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 ZNF559Q9BR84 538 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 G6PC3Q9BUM1 346 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 PLA2G12AQ9BZM1 189 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 RTN4RQ9BZR6 473 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 SPRY4Q9C004 299 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 OR8D2Q9GZM6 311 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 WWTR1Q9GZV5 400 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 DSN1Q9H410 356 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 ERVK-18Q9QC07 812 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 ENOPH1Q9UHY7 261 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 PSORS1C1Q9UIG5 152 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 SLC13A4Q9UKG4 626 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 SLC7A7Q9UM01 511 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 CFL2Q9Y281 166 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 CLCA3PQ9Y6N3 262 aa5.99□□□□□ -1.45
CAPN3-210ENST00000561817 EXPH5Q8NEV8 1989 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 EP300Q09472 2414 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-210ENST00000561817 LOC102723996A0A087X1L8 192 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 TRBV23-1A0A0A0MS06 115 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 IGHV3-20A0A0C4DH32 117 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 C2orf92A0A1B0GVN3 265 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 A0A1W2PNU3 283 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-210ENST00000561817 SAGE2PA6NJ88 616 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 AGRPO00253 132 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 CDC42EP2O14613 210 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 POLR1CO15160 346 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-210ENST00000561817 SUSD5O60279 629 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 FADS1O60427 444 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 ZNF354AO60765 605 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-210ENST00000561817 PTP4A3O75365 173 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 FBXO24O75426 580 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 TPPPO94811 219 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 UTS2O95399 124 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 SOX14O95416 240 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 NADKO95544 446 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-210ENST00000561817 MT-ND2P03891 347 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 UMODP07911 640 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 ITIH1P19827 911 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 MAKP20794 623 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 GSTM3P21266 225 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 TBXA2RP21731 343 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 MST1P26927 711 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 CSTF2P33240 577 aaKnown RBP eCLIP5.98□□□□□ -1.45
CAPN3-210ENST00000561817 ETV5P41161 510 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 STAT5AP42229 794 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 GAS1P54826 345 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 EMP2P54851 167 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 TPD52P55327 224 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-210ENST00000561817 CSNK2BP67870 215 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 OCA2Q04671 838 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 PRKCDQ05655 676 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 SKP2Q13309 424 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 IRF3Q14653 427 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 RAB39AQ14964 217 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 ODF1Q14990 250 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 NDUFAF6Q330K2 333 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 MFSD4BQ5TF39 518 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 KIRREL2Q6UWL6 708 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 ZNF730Q6ZMV8 503 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 TMPRSS11FQ6ZWK6 438 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 RANBP3LQ86VV4 465 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-210ENST00000561817 NRMQ8IXM6 262 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 RNF113BQ8IZP6 322 aaKnown RBP5.98□□□□□ -1.45
CAPN3-210ENST00000561817 SLC34A3Q8N130 599 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 IQCF1Q8N6M8 205 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 B3GNT7Q8NFL0 401 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 OR4Q3Q8NH05 313 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 LILRB1Q8NHL6 650 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-210ENST00000561817 PIGXQ8TBF5 258 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 FAR1Q8WVX9 515 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 TRUB1Q8WWH5 349 aaKnown RBP5.98□□□□□ -1.45
CAPN3-210ENST00000561817 GGHQ92820 318 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 EFHD2Q96C19 240 aaPredicted RBP5.98□□□□□ -1.45
CAPN3-210ENST00000561817 DGCR14Q96DF8 476 aaKnown RBP5.98□□□□□ -1.45
CAPN3-210ENST00000561817 FAM46AQ96IP4 442 aaKnown RBP5.98□□□□□ -1.45
CAPN3-210ENST00000561817 ART5Q96L15 291 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 NODALQ96S42 347 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 DOK1Q99704 481 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 CTRCQ99895 268 aa5.98□□□□□ -1.45
CAPN3-210ENST00000561817 TUBA1CQ9BQE3 449 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms