RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 TNFSF13O75888 250 aa17.85■□□□□ 0.45
TSPAN3-210ENST00000561277 UQCRBP14927 111 aa17.85■□□□□ 0.45
TSPAN3-210ENST00000561277 CCNA2P20248 432 aa17.85■□□□□ 0.45
TSPAN3-210ENST00000561277 ADSLP30566 484 aaPredicted RBP17.85■□□□□ 0.45
TSPAN3-210ENST00000561277 SNTB1Q13884 538 aaKnown RBP17.85■□□□□ 0.45
TSPAN3-210ENST00000561277 ADRM1Q16186 407 aa17.85■□□□□ 0.45
TSPAN3-210ENST00000561277 VWA1Q6PCB0 445 aa17.85■□□□□ 0.45
TSPAN3-210ENST00000561277 KRT73Q86Y46 540 aa17.85■□□□□ 0.45
TSPAN3-210ENST00000561277 ZNF440Q8IYI8 595 aa17.85■□□□□ 0.45
TSPAN3-210ENST00000561277 OR5B2Q96R09 309 aa17.85■□□□□ 0.45
TSPAN3-210ENST00000561277 CCDC106Q9BWC9 280 aa17.85■□□□□ 0.45
TSPAN3-210ENST00000561277 SPATA9Q9BWV2 254 aa17.85■□□□□ 0.45
TSPAN3-210ENST00000561277 ARMC7Q9H6L4 198 aa17.85■□□□□ 0.45
TSPAN3-210ENST00000561277 COQ10BQ9H8M1 238 aa17.85■□□□□ 0.45
TSPAN3-210ENST00000561277 TIGARQ9NQ88 270 aa17.85■□□□□ 0.45
TSPAN3-210ENST00000561277 CHRNA9Q9UGM1 479 aa17.85■□□□□ 0.45
TSPAN3-210ENST00000561277 CHST2Q9Y4C5 530 aa17.85■□□□□ 0.45
TSPAN3-210ENST00000561277 PKDREJQ9NTG1 2253 aa17.84■□□□□ 0.45
TSPAN3-210ENST00000561277 CCDC22O60826 627 aa17.84■□□□□ 0.45
TSPAN3-210ENST00000561277 SMNDC1O75940 238 aaKnown RBP eCLIP17.84■□□□□ 0.45
TSPAN3-210ENST00000561277 PLGP00747 810 aaPredicted RBP17.84■□□□□ 0.45
TSPAN3-210ENST00000561277 ETS2P15036 469 aa17.84■□□□□ 0.45
TSPAN3-210ENST00000561277 IGFBP2P18065 325 aa17.84■□□□□ 0.45
TSPAN3-210ENST00000561277 APOBEC1P41238 236 aaKnown RBP17.84■□□□□ 0.45
TSPAN3-210ENST00000561277 CYLC2Q14093 348 aaPredicted RBP17.84■□□□□ 0.45
TSPAN3-210ENST00000561277 ZNF239Q16600 458 aaKnown RBP17.84■□□□□ 0.45
TSPAN3-210ENST00000561277 CPLX4Q7Z7G2 160 aa17.84■□□□□ 0.45
TSPAN3-210ENST00000561277 POU5F2Q8N7G0 328 aa17.84■□□□□ 0.45
TSPAN3-210ENST00000561277 ROBO4Q8WZ75 1007 aa17.84■□□□□ 0.45
TSPAN3-210ENST00000561277 DNAJA3Q96EY1 480 aa17.84■□□□□ 0.45
TSPAN3-210ENST00000561277 LRRC46Q96FV0 321 aa17.84■□□□□ 0.45
TSPAN3-210ENST00000561277 SPOCK3Q9BQ16 436 aa17.84■□□□□ 0.45
TSPAN3-210ENST00000561277 PACSIN3Q9UKS6 424 aa17.84■□□□□ 0.45
TSPAN3-210ENST00000561277 ANGPT4Q9Y264 503 aa17.84■□□□□ 0.45
TSPAN3-210ENST00000561277 SPIN1Q9Y657 262 aaPredicted RBP17.84■□□□□ 0.45
TSPAN3-210ENST00000561277 FRS3O43559 492 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 TFPIP10646 304 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 PRG2P13727 222 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 PRF1P14222 555 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 DRD4P21917 467 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 CPA2P48052 419 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 DLX5P56178 289 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 SYT14P1Q58G82 188 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 RABL3Q5HYI8 236 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 COQ5Q5HYK3 327 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 NANOGP8Q6NSW7 305 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 MTDHQ86UE4 582 aaKnown RBP17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 PTOV1Q86YD1 416 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 MCEMP1Q8IX19 187 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 CADM2Q8N3J6 435 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 C11orf65Q8NCR3 313 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 HIPK4Q8NE63 616 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 OR10A6Q8NH74 314 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 RNASE6Q93091 150 aaKnown RBP17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 CPNE4Q96A23 557 aaPredicted RBP17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 LRRC58Q96CX6 371 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 REXO5Q96IC2 774 aaKnown RBP17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 PIF1Q9H611 641 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 KAT8Q9H7Z6 458 aaKnown RBP17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 NANOGQ9H9S0 305 aa17.83■□□□□ 0.45
TSPAN3-210ENST00000561277 GMNCA6NCL1 334 aa17.83■□□□□ 0.44
TSPAN3-210ENST00000561277 FXYD1O00168 92 aa17.83■□□□□ 0.44
TSPAN3-210ENST00000561277 SLC22A2O15244 555 aa17.83■□□□□ 0.44
TSPAN3-210ENST00000561277 CRHP06850 196 aa17.83■□□□□ 0.44
TSPAN3-210ENST00000561277 TACR3P29371 465 aa17.83■□□□□ 0.44
TSPAN3-210ENST00000561277 KIR2DL2P43627 348 aaPredicted RBP17.83■□□□□ 0.44
TSPAN3-210ENST00000561277 ZSWIM7Q19AV6 140 aa17.83■□□□□ 0.44
TSPAN3-210ENST00000561277 ZNF550Q7Z398 422 aa17.83■□□□□ 0.44
TSPAN3-210ENST00000561277 SERPINA11Q86U17 422 aa17.83■□□□□ 0.44
TSPAN3-210ENST00000561277 ACBD4Q8NC06 268 aa17.83■□□□□ 0.44
TSPAN3-210ENST00000561277 SLC25A43Q8WUT9 341 aaPredicted RBP17.83■□□□□ 0.44
TSPAN3-210ENST00000561277 RCN3Q96D15 328 aa17.83■□□□□ 0.44
TSPAN3-210ENST00000561277 ZNF607Q96SK3 696 aa17.83■□□□□ 0.44
TSPAN3-210ENST00000561277 SPATA5L1Q9BVQ7 753 aa17.83■□□□□ 0.44
TSPAN3-210ENST00000561277 PIGMQ9H3S5 423 aa17.83■□□□□ 0.44
TSPAN3-210ENST00000561277 JKAMPQ9P055 326 aa17.83■□□□□ 0.44
TSPAN3-210ENST00000561277 OSGIN1Q9UJX0 560 aa17.83■□□□□ 0.44
TSPAN3-210ENST00000561277 DCHS2Q6V1P9 2916 aa17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 IGHV3-15A0A0B4J1V0 119 aa17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 SYT5O00445 386 aa17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 FAAHO00519 579 aa17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 CPOXP36551 454 aa17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 ACAA2P42765 397 aaKnown RBP17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 SLC1A3P43003 542 aa17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 HTR3AP46098 478 aa17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 POLR2HP52434 150 aaKnown RBP17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 COPZ1P61923 177 aa17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 HOXC5Q00444 222 aa17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 FBXL19-AS1Q494R0 122 aa17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 EEF1A1P5Q5VTE0 462 aa17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 BTLAQ7Z6A9 289 aa17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 DMRTC2Q8IXT2 367 aaPredicted RBP17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 PCYOX1LQ8NBM8 494 aa17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 ABHD3Q8WU67 409 aa17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 STARD4Q96DR4 205 aa17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 RBM24Q9BX46 236 aaKnown RBP17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 OR11A1Q9GZK7 315 aa17.82■□□□□ 0.44
TSPAN3-210ENST00000561277 TMED7-TICAM2A0A0A6YYA0 188 aa17.81■□□□□ 0.44
TSPAN3-210ENST00000561277 PRKAR1BP31321 381 aa17.81■□□□□ 0.44
TSPAN3-210ENST00000561277 CTBP2P56545 445 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms