RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 MAT2AP31153 395 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 SOX18P35713 384 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 RNF144AP50876 292 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 ZNF155Q12901 538 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 UAP1L1Q3KQV9 507 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 TMEM35AQ53FP2 167 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 ATRAIDQ6UW56 229 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 ZNF793Q6ZN11 406 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 TMEM17Q86X19 198 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 ZFP41Q8N8Y5 198 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 FAM98AQ8NCA5 519 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 KAT2AQ92830 837 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 SCARF2Q96GP6 870 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 C10orf90Q96M02 699 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 SAP130Q9H0E3 1048 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 SLC25A32Q9H2D1 315 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 MRPS30Q9NP92 439 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 NANSQ9NR45 359 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 OR6C2Q9NZP2 312 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 GPR160Q9UJ42 338 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 FBXW2Q9UKT8 454 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 CCDC88CQ9P219 2028 aa12.95□□□□□ -0.34
RABGGTA-220ENST00000560998 FZD7O75084 574 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 CBX7O95931 251 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 IGHA1P01876 353 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 SSR2P43308 183 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 CCR6P51684 374 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 KIAA1024LP59773 190 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 KLF9Q13886 244 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 UBXN2BQ14CS0 331 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 MLC1Q15049 377 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 TRAM1Q15629 374 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 RPE65Q16518 533 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 ZSWIM7Q19AV6 140 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 CCDC157Q569K6 752 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 FAM209BQ5JX69 171 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 ENTPD8Q5MY95 495 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 ELFN2Q5R3F8 820 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 TCTN3Q6NUS6 607 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 SLC30A6Q6NXT4 461 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 OR6V1Q8N148 313 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 OR5M9Q8NGP3 310 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 ZDHHC1Q8WTX9 485 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 TMEM19Q96HH6 336 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 SEC22CQ9BRL7 303 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 KLHL31Q9H511 634 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 EQTNQ9NQ60 294 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 AKAP7Q9P0M2 348 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 PIPOXQ9P0Z9 390 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 MGAT4CQ9UBM8 478 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 KLF15Q9UIH9 416 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 PLCL2Q9UPR0 1127 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 SNRNP200O75643 2136 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 TBC1D3DA0A087WVF3 549 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 TBC1D3IA0A087WXS9 549 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 TBC1D3EA0A087X179 549 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 TBC1D3KA0A087X1G2 549 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 C2orf92A0A1B0GVN3 265 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 A0A1W2PRQ8 180 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 TCRBV16S1A1N1A0A5B0 115 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 TBC1D3FA6NER0 549 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 ANXA2P2A6NMY6 339 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 TBC1D3LB9A6J9 549 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 PRR23D1E9PI22 279 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 SUSD5O60279 629 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 OR2A4O95047 310 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 HPP00738 406 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 HPXP02790 462 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 STATHP02808 62 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 TBC1D3HP0C7X1 549 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 PRR23D2P0DMB1 279 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 COL9A1P20849 921 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 PEBP1P30086 187 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 HAAOP46952 286 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 SNTB2Q13425 540 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 HFEQ30201 348 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 TBC1D3GQ6DHY5 549 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 VASNQ6EMK4 673 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 TBC1D3CQ6IPX1 549 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 SFXN4Q6P4A7 337 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 DEF8Q6ZN54 512 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 ZNF704Q6ZNC4 412 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 TBC1D3Q8IZP1 549 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 BEST4Q8NFU0 473 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 TRMT10AQ8TBZ6 339 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 CNOT9Q92600 299 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 RAB8BQ92930 207 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 ELP4Q96EB1 424 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 OR2A7Q96R45 310 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 S1PR5Q9H228 398 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 FGF22Q9HCT0 170 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 PTGFRNQ9P2B2 879 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 CTSFQ9UBX1 484 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 CYB5R1Q9UHQ9 305 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 GPN3Q9UHW5 284 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 EXOGQ9Y2C4 368 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 CHST2Q9Y4C5 530 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 MYO9BQ13459 2157 aa12.94□□□□□ -0.34
RABGGTA-220ENST00000560998 A0A1W2PQF6 199 aa12.93□□□□□ -0.34
RABGGTA-220ENST00000560998 OR2M5A3KFT3 312 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms