RNA–Protein interactions for RNA: ENST00000560952.1

RNF111-211, Transcript of ring finger protein 111, humanhuman

TSL 1 (best)

Gene RNF111, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-211ENST00000560952 PMCHP20382 165 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 GZMHP20718 246 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 MMP11P24347 488 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 CALML3P27482 149 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 CD82P27701 267 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 HOXD9P28356 352 aaPredicted RBP2.29□□□□□ -2.04
RNF111-211ENST00000560952 FMO4P31512 558 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 PCK1P35558 622 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 GJC1P36383 396 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 CYB561P49447 251 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 LIMK2P53671 638 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 LOXL3P58215 753 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 FAM3AP98173 230 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 GUCY2DQ02846 1103 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 EGR4Q05215 589 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 ZNF91Q05481 1191 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 SLC34A1Q06495 639 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 DLG1Q12959 904 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 TNK1Q13470 666 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 GK2Q14410 553 aaPredicted RBP2.29□□□□□ -2.04
RNF111-211ENST00000560952 OR4D1Q15615 310 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 NPY5RQ15761 445 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 CALCRLQ16602 461 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 UGCGQ16739 394 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 HAGHQ16775 308 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 CD300EQ496F6 205 aaPredicted RBP2.29□□□□□ -2.04
RNF111-211ENST00000560952 AKIRIN2Q53H80 203 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 ESCO2Q56NI9 601 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 OR2B11Q5JQS5 317 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 FAM69BQ5VUD6 431 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 PRR5LQ6MZQ0 368 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 LPCAT3Q6P1A2 487 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 RBMS3Q6XE24 437 aaKnown RBP2.29□□□□□ -2.04
RNF111-211ENST00000560952 DPY19L3Q6ZPD9 716 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 HDDC2Q7Z4H3 204 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 TMEM144Q7Z5S9 345 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 SCD5Q86SK9 330 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 ZNF589Q86UQ0 364 aaPredicted RBP2.29□□□□□ -2.04
RNF111-211ENST00000560952 WDFY1Q8IWB7 410 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 NANOGP1Q8N7R0 232 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 TERB1Q8NA31 727 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 HSD17B11Q8NBQ5 300 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 ENGASEQ8NFI3 743 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 B3GNT7Q8NFL0 401 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 OR5H6Q8NGV6 325 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 WDR36Q8NI36 951 aaKnown RBP2.29□□□□□ -2.04
RNF111-211ENST00000560952 PIGXQ8TBF5 258 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 M1APQ8TC57 530 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 SDR42E1Q8WUS8 393 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 APH1BQ8WW43 257 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 SOCS4Q8WXH5 440 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 SMARCD2Q92925 531 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 GLYATL1Q969I3 302 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 FAM131CQ96AQ9 280 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 VOPP1Q96AW1 172 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 FAM136AQ96C01 138 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 OTUB1Q96FW1 271 aaPredicted RBP2.29□□□□□ -2.04
RNF111-211ENST00000560952 CELF6Q96J87 481 aaKnown RBP2.29□□□□□ -2.04
RNF111-211ENST00000560952 LMLNQ96KR4 655 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 POM121L2Q96KW2 1035 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 TMEM56Q96MV1 263 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 ACCSQ96QU6 501 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 MCCC1Q96RQ3 725 aaPredicted RBP2.29□□□□□ -2.04
RNF111-211ENST00000560952 STACQ99469 402 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 TSNAXQ99598 290 aaKnown RBP2.29□□□□□ -2.04
RNF111-211ENST00000560952 TCEAL7Q9BRU2 100 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 RSG1Q9BU20 258 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 ZNF426Q9BUY5 554 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 PTDSS2Q9BVG9 487 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 ELOVL1Q9BW60 279 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 DDA1Q9BW61 102 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 UCK2Q9BZX2 261 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 SMYD3Q9H7B4 428 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 WDR41Q9HAD4 459 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 NIT2Q9NQR4 276 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 TMLHEQ9NVH6 421 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 PLEKHJ1Q9NW61 149 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 TREM2Q9NZC2 230 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 DKKL1Q9UK85 242 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 SH2B3Q9UQQ2 575 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 MRPS18CQ9Y3D5 142 aaKnown RBP2.29□□□□□ -2.04
RNF111-211ENST00000560952 YIPF1Q9Y548 306 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 LRP12Q9Y561 859 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 TMEM56-RWDD3S4R434 201 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 TARBP1Q13395 1621 aaKnown RBP2.29□□□□□ -2.04
RNF111-211ENST00000560952 WRNQ14191 1432 aaPredicted RBP eCLIP2.29□□□□□ -2.04
RNF111-211ENST00000560952 KIAA0232Q92628 1395 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 HYKKA2RU49 373 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 PRSS29PA6NIE9 313 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 SAGE2PA6NJ88 616 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 H0Y980 276 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 EEF2KO00418 725 aaKnown RBP2.29□□□□□ -2.04
RNF111-211ENST00000560952 OR1F1O43749 312 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 AIREO43918 545 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 PCDH7O60245 1069 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 DCTN3O75935 186 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 VAPBO95292 243 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 TNFAIP8O95379 198 aa2.29□□□□□ -2.04
RNF111-211ENST00000560952 UTS2O95399 124 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms