RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 PAQR5Q9NXK6 330 aaPredicted RBP13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 IFT52Q9Y366 437 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 CAPN7Q9Y6W3 813 aa13.68□□□□□ -0.22
SNRPA1-213ENST00000560856 LOC100653049A0A140TA62 436 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 A0A1W2PNR3 127 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 CFAP73A6NFT4 308 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 KRT34O76011 436 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 CGAP01215 116 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 PABPC4LP0CB38 370 aaKnown RBP13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 APOBEC1P41238 236 aaKnown RBP13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 PCBP3P57721 371 aaKnown RBP13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 CARD18P57730 90 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 SCARB2Q14108 478 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 LARS2Q15031 903 aaKnown RBP13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 ZSWIM7Q19AV6 140 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 OR2A2Q6IF42 318 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 NANOGP8Q6NSW7 305 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 MEX3BQ6ZN04 569 aaKnown RBP13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 GRINAQ7Z429 371 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 SPATA21Q7Z572 469 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 BTLAQ7Z6A9 289 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 TREML1Q86YW5 311 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 ZNF440Q8IYI8 595 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 ATP6V1C2Q8NEY4 427 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 LRRC58Q96CX6 371 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 NANOGQ9H9S0 305 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 ZNF232Q9UNY5 417 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 MPDZO75970 2070 aa13.67□□□□□ -0.22
SNRPA1-213ENST00000560856 APCP25054 2843 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 GMNCA6NCL1 334 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 BBIP1A8MTZ0 92 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 C5orf58C9J3I9 102 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 MRASO14807 208 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 SNX3O60493 162 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 TPST1O60507 370 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 NPPAP01160 153 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 COX6B1P14854 86 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 SLC1A3P43003 542 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 MAPRE2Q15555 327 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 ZNF239Q16600 458 aaKnown RBP13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 ZNF311Q5JNZ3 666 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 PDSS1Q5T2R2 415 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 EEF1A1P5Q5VTE0 462 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 C3orf33Q6P1S2 294 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 VWA1Q6PCB0 445 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 DHRS4L2Q6PKH6 230 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 CALHM3Q86XJ0 350 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 ZZZ3Q8IYH5 903 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 HIPK4Q8NE63 616 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 ZNF563Q8TA94 476 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 RNASE6Q93091 150 aaKnown RBP13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 SLC35B4Q969S0 331 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 MYLK2Q9H1R3 596 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 OSGIN1Q9UJX0 560 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 PRDM4Q9UKN5 801 aa13.66□□□□□ -0.22
SNRPA1-213ENST00000560856 TMED7-TICAM2A0A0A6YYA0 188 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 GJE1A6NN92 205 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 A8MXE2 369 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 FRS3O43559 492 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 CCDC22O60826 627 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 FCGR2AP12318 317 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 KLK2P20151 261 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 SLC6A2P23975 617 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 PRKAR1BP31321 381 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 RAC3P60763 192 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 RBBP4Q09028 425 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 CYLC2Q14093 348 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 GLIPR1L2Q4G1C9 344 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 SYT14P1Q58G82 188 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 RABL3Q5HYI8 236 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 SERPINA11Q86U17 422 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 MTDHQ86UE4 582 aaKnown RBP13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 POU5F2Q8N7G0 328 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 C11orf65Q8NCR3 313 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 OR10A6Q8NH74 314 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 RNF128Q8TEB7 428 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 SLC25A43Q8WUT9 341 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 ROBO4Q8WZ75 1007 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 ARL5BQ96KC2 179 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 PIGMQ9H3S5 423 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 SERINC1Q9NRX5 453 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 FAM53CQ9NYF3 392 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 CHRNA9Q9UGM1 479 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 PACSIN3Q9UKS6 424 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 MCTS1Q9ULC4 181 aaKnown RBP13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 TMED7Q9Y3B3 224 aa13.65□□□□□ -0.22
SNRPA1-213ENST00000560856 EEF1E1-BLOC1S5C9J1V9 151 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 MSTNO14793 375 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 EEF1E1O43324 174 aaKnown RBP13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 SS18L1O75177 396 aaPredicted RBP13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 MFN2O95140 757 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 SYNGR4O95473 234 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 ENPP1P22413 925 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 TACR3P29371 465 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 AQP1P29972 269 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 HTR3AP46098 478 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 GNGT1P63211 74 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 HOXC5Q00444 222 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 DMTNQ08495 405 aa13.64□□□□□ -0.23
SNRPA1-213ENST00000560856 CYP51A1Q16850 503 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms