RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 CDCP2Q5VXM1 449 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 FAM199XQ6PEV8 388 aaPredicted RBP11.8□□□□□ -0.52
SNX1-211ENST00000560829 NUP54Q7Z3B4 507 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 OAFQ86UD1 273 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 MARCH3Q86UD3 253 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 MISPQ8IVT2 679 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 TMCO5AQ8N6Q1 288 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 AMER2Q8N7J2 671 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 SUMF1Q8NBK3 374 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 ANKK1Q8NFD2 765 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 C8orf44Q96CB5 159 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 SGTBQ96EQ0 304 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 PHOX2BQ99453 314 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 STRADBQ9C0K7 418 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.8□□□□□ -0.52
SNX1-211ENST00000560829 BAIAP2Q9UQB8 552 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 LOXL2Q9Y4K0 774 aa11.8□□□□□ -0.52
SNX1-211ENST00000560829 COL27A1Q8IZC6 1860 aaPredicted RBP11.8□□□□□ -0.52
SNX1-211ENST00000560829 M0R082 166 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 SEC16AO15027 2179 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 HCRTR2O43614 444 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 ZFAND5O76080 213 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 UMODP07911 640 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 CD63P08962 238 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 CCNA2P20248 432 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 INSM1Q01101 510 aaPredicted RBP11.79□□□□□ -0.52
SNX1-211ENST00000560829 RAB40BQ12829 278 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 CTF1Q16619 201 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 KLHL22Q53GT1 634 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 DCAF12Q5T6F0 453 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 NXNL2Q5VZ03 156 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 THSD4Q6ZMP0 1018 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 RTL4Q6ZR62 310 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 ZNF367Q7RTV3 350 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 OR2Y1Q8NGV0 311 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 LIPHQ8WWY8 451 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 RFKQ969G6 155 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 PLEKHA8Q96JA3 519 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 CDC6Q99741 560 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 EDEM2Q9BV94 578 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 ENKD1Q9H0I2 346 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 FGF20Q9NP95 211 aaPredicted RBP11.79□□□□□ -0.52
SNX1-211ENST00000560829 TMEM9BQ9NQ34 198 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 IL20RAQ9UHF4 553 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 DIMT1Q9UNQ2 313 aaKnown RBP11.79□□□□□ -0.52
SNX1-211ENST00000560829 GPR52Q9Y2T5 361 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 B3GALT1Q9Y5Z6 326 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 KMT2EQ8IZD2 1858 aa11.79□□□□□ -0.52
SNX1-211ENST00000560829 A0A1W2PQ72 361 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 ELOA3DA6NLF2 546 aaPredicted RBP11.78□□□□□ -0.52
SNX1-211ENST00000560829 ZNF354AO60765 605 aaPredicted RBP11.78□□□□□ -0.52
SNX1-211ENST00000560829 CH25HO95992 272 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 TGFBR2P37173 567 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 CCR4P51679 360 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 TIGD6Q17RP2 521 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 ISXQ2M1V0 245 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 ELOA3BQ3SY89 546 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 SLC46A3Q7Z3Q1 461 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 P2RY8Q86VZ1 359 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 ELOA3Q8NG57 546 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 OR5W2Q8NH69 310 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 ELP5Q8TE02 316 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 ZFAND2BQ8WV99 257 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 HGDQ93099 445 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 ZNF524Q96C55 264 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 LIN37Q96GY3 246 aaPredicted RBP11.78□□□□□ -0.52
SNX1-211ENST00000560829 TNFRSF13CQ96RJ3 184 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 ZNF700Q9H0M5 742 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 ZBTB20Q9HC78 741 aaPredicted RBP11.78□□□□□ -0.52
SNX1-211ENST00000560829 MCCC2Q9HCC0 563 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 CMC2Q9NRP2 79 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 MYOTQ9UBF9 498 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 TRAV27A0A087WT01 109 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 CDC40O60508 579 aaKnown RBP eCLIP11.78□□□□□ -0.522e-6■■■■■ 31.7
SNX1-211ENST00000560829 OR7A10O76100 309 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 PGCP20142 388 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 SLC6A6P31641 620 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 ETV5P41161 510 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 MTNR1AP48039 350 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 P2RX1P51575 399 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 RPS4XP62701 263 aaKnown RBP11.78□□□□□ -0.52
SNX1-211ENST00000560829 NFATC3Q12968 1075 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 C3orf38Q5JPI3 329 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 LYPD8Q6UX82 237 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 C16orf47Q6ZP98 133 aaPredicted RBP11.78□□□□□ -0.52
SNX1-211ENST00000560829 LSRQ86X29 649 aaPredicted RBP11.78□□□□□ -0.52
SNX1-211ENST00000560829 GALNT6Q8NCL4 622 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 OR52I1Q8NGK6 324 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 OR51A7Q8NH64 312 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 TTC9Q92623 222 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 TMCO6Q96DC7 493 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 LGALS12Q96DT0 336 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 KLHDC3Q9BQ90 382 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 DDA1Q9BW61 102 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 HINT3Q9NQE9 182 aaKnown RBP11.78□□□□□ -0.52
SNX1-211ENST00000560829 TAS2R16Q9NYV7 291 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 LSM2Q9Y333 95 aaKnown RBP11.78□□□□□ -0.52
SNX1-211ENST00000560829 PTRH2Q9Y3E5 179 aaKnown RBP11.78□□□□□ -0.52
SNX1-211ENST00000560829 ZNF337Q9Y3M9 751 aa11.78□□□□□ -0.52
SNX1-211ENST00000560829 PCDHGA1Q9Y5H4 931 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms