RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 SULT2B1O00204 365 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 AP3D1O14617 1153 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 HNRNPCL1O60812 293 aaKnown RBP11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 PRKD3O94806 890 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 NTN1O95631 604 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 HNRNPCL4P0DMR1 293 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 CD8BP10966 210 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 EPXP11678 715 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 ENPP1P22413 925 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 CD79BP40259 229 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 ARFIP2P53365 341 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 COPZ1P61923 177 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 FAM27E3Q08E93 113 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 RNPS1Q15287 305 aaKnown RBP11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 SYT14P1Q58G82 188 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 LRIF1Q5T3J3 769 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 GCNT6Q5T4J0 391 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 METTL21CQ5VZV1 264 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 AP1ARQ63HQ0 302 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 ZNF836Q6ZNA1 936 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 FCRLAQ7L513 359 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 GRINAQ7Z429 371 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 ZNF440Q8IYI8 595 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 CADM2Q8N3J6 435 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 OR6K3Q8NGY3 331 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 SLC25A43Q8WUT9 341 aaPredicted RBP11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 STON2Q8WXE9 905 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 KLHL4Q9C0H6 718 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 A4GALTQ9NPC4 353 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 SLC25A37Q9NYZ2 338 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 VAPAQ9P0L0 249 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 CHRNA9Q9UGM1 479 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 CORO2BQ9UQ03 480 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 ZNF443Q9Y2A4 671 aaPredicted RBP11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 IFT52Q9Y366 437 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 FBN2P35556 2912 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 APCP25054 2843 aa11.6□□□□□ -0.55
CTDSPL2-209ENST00000560620 A6NNC1 897 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 ETV2O00321 342 aaPredicted RBP11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 DNAJA2O60884 412 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 SS18L1O75177 396 aaPredicted RBP11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 CTAG2O75638 210 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 GKN3PP0CG01 181 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 CD1EP15812 388 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 RPS4Y1P22090 263 aaKnown RBP11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 HTR3AP46098 478 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 POLR2HP52434 150 aaKnown RBP11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 RAC3P60763 192 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 CSNK2A1P68400 391 aaPredicted RBP11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 MAPK11Q15759 364 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 ZNF311Q5JNZ3 666 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 DHDDSQ86SQ9 333 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 CDH24Q86UP0 819 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 KRT73Q86Y46 540 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 SLC43A2Q8N370 569 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 NFKBIDQ8NI38 313 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 BBS10Q8TAM1 723 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 RNF128Q8TEB7 428 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 ZHX1-C8orf76Q96EF9 292 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 MED18Q9BUE0 208 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 CCDC106Q9BWC9 280 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 CLEC4MQ9H2X3 399 aaPredicted RBP11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 COQ10BQ9H8M1 238 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 FANCFQ9NPI8 374 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 SLC52A3Q9NQ40 469 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 ELOVL5Q9NYP7 299 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 DSPPQ9NZW4 1301 aa11.59□□□□□ -0.55
CTDSPL2-209ENST00000560620 LRBAP50851 2863 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 TMED7-TICAM2A0A0A6YYA0 188 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 CDHR4A6H8M9 788 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 ENO4A6NNW6 628 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 C16orf97H3BN30 126 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 ADAM11O75078 769 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 PGM3O95394 542 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 CGAP01215 116 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 THBS1P07996 1170 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 HOXB9P17482 250 aaPredicted RBP11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 SLC6A2P23975 617 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 CXCR1P25024 350 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 TACR3P29371 465 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 AGTR1P30556 359 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 SLC1A3P43003 542 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 DIO1P49895 249 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 CDK6Q00534 326 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 PLAURQ03405 335 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 EPS8Q12929 822 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 NFYCQ13952 458 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 GUSBP1Q15486 140 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 CYP51A1Q16850 503 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 MMEL1Q495T6 779 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 ANKRD34AQ69YU3 496 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 REEP3Q6NUK4 255 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 ZNF474Q6S9Z5 364 aaPredicted RBP11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 ZNF550Q7Z398 422 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 TUSC5Q8IXB3 177 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 MSRB3Q8IXL7 192 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 CLIP4Q8N3C7 705 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 DDIT4LQ96D03 193 aa11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 ZC3HAV1LQ96H79 300 aaKnown RBP11.58□□□□□ -0.56
CTDSPL2-209ENST00000560620 OR11A1Q9GZK7 315 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms