RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 SH3D21A4FU49 640 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 NR5A2O00482 541 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 FAAHO00519 579 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 CYP7B1O75881 506 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 PABPC4LP0CB38 370 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 APOBEC1P41238 236 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 CRISP3P54108 245 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 GNA13Q14344 377 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 ZNF239Q16600 458 aaKnown RBP13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 KRTAP21-3Q3LHN1 58 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 AGKQ53H12 422 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 PAGE3Q5JUK9 113 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 PRAMEF8Q5VWM4 474 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 PRAMEF7Q5VXH5 474 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 METTL21CQ5VZV1 264 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 C3orf33Q6P1S2 294 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 ZNF474Q6S9Z5 364 aaPredicted RBP13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 PLEKHM3Q6ZWE6 761 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 HMGN2P46Q86SG4 172 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 ARFGAP2Q8N6H7 521 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 OR6K3Q8NGY3 331 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 RNF128Q8TEB7 428 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 WDR60Q8WVS4 1066 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 CCDC106Q9BWC9 280 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 SRXN1Q9BYN0 137 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 PRRG4Q9BZD6 226 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 PLEKHF2Q9H8W4 249 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 GP6Q9HCN6 339 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 BCL2L10Q9HD36 194 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 NPHS2Q9NP85 383 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 A4GALTQ9NPC4 353 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 TIGARQ9NQ88 270 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 PLSCR4Q9NRQ2 329 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 DCTN4Q9UJW0 460 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 TRIM33Q9UPN9 1127 aa13.56□□□□□ -0.24
SNRPA1-210ENST00000560383 A0A0G2JPF8 293 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 HNRNPCL2B2RXH8 293 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 HNRNPCL3B7ZW38 293 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 HNRNPCL1O60812 293 aaKnown RBP13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 ATE1O95260 518 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 HRGP04196 525 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 THBS1P07996 1170 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 HNRNPCL4P0DMR1 293 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 IL7RP16871 459 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 KLK2P20151 261 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 RAC3P60763 192 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 SIRPAP78324 504 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 MERTKQ12866 999 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 ZSWIM7Q19AV6 140 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 MRPL2Q5T653 305 aaKnown RBP13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 GTF2IRD2BQ6EKJ0 949 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 GRINAQ7Z429 371 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 GTF2IRD2Q86UP8 949 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 PEX5LQ8IYB4 626 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 TSPEARQ8WU66 669 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 SLC25A43Q8WUT9 341 aaPredicted RBP13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 THOC1Q96FV9 657 aaKnown RBP13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 SERINC1Q9NRX5 453 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 ELOVL5Q9NYP7 299 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 VAPAQ9P0L0 249 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 NDRG3Q9UGV2 375 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 EMC9Q9Y3B6 208 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 TESMINQ9Y4I5 508 aa13.55□□□□□ -0.24
SNRPA1-210ENST00000560383 HEATR5AQ86XA9 2040 aa13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 A0A0G2JND7 137 aa13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 CDHR4A6H8M9 788 aa13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 SMNDC1O75940 238 aaKnown RBP eCLIP13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 BCHEP06276 602 aa13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 NUDT7P0C024 238 aa13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 PPIBP23284 216 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 FKBP2P26885 142 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 RYKP34925 604 aa13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 CD79BP40259 229 aa13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 KEAP1Q14145 624 aa13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 RNPS1Q15287 305 aaKnown RBP13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 DEFB113Q30KQ7 82 aa13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 RNF220Q5VTB9 566 aa13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 DLEU7Q6UYE1 221 aa13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 DPP10Q8N608 796 aa13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 OR52P1PQ8NH57 321 aa13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 TMEM19Q96HH6 336 aa13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 OPN3Q9H1Y3 402 aaPredicted RBP13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 CCDC134Q9H6E4 229 aa13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 MED4Q9NPJ6 270 aa13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 PROCRQ9UNN8 238 aa13.54□□□□□ -0.24
SNRPA1-210ENST00000560383 A0A1W2PNR3 127 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 TMEM247A6NEH6 219 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 AP3D1O14617 1153 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 PLGP00747 810 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 FOSL1P15407 271 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 GPX2P18283 190 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 NCF2P19878 526 aaPredicted RBP13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 SLC7A1P30825 629 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 CPOXP36551 454 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 HTR3AP46098 478 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 IDH2P48735 452 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 CLK1P49759 484 aaKnown RBP13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 MAP2K6P52564 334 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 FAM27E3Q08E93 113 aa13.53□□□□□ -0.24
SNRPA1-210ENST00000560383 EPS8Q12929 822 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms