RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 ACER3Q9NUN7 267 aa15.37■□□□□ 0.05
CRTC3-208ENST00000560098 NPAP1Q9NZP6 1156 aa15.37■□□□□ 0.05
CRTC3-208ENST00000560098 GDF2Q9UK05 429 aaPredicted RBP15.37■□□□□ 0.05
CRTC3-208ENST00000560098 OR5H1A6NKK0 313 aa15.36■□□□□ 0.05
CRTC3-208ENST00000560098 ABCD4O14678 606 aa15.36■□□□□ 0.05
CRTC3-208ENST00000560098 TLX2O43763 284 aaPredicted RBP15.36■□□□□ 0.05
CRTC3-208ENST00000560098 CD5LO43866 347 aa15.36■□□□□ 0.05
CRTC3-208ENST00000560098 ADAM11O75078 769 aa15.36■□□□□ 0.05
CRTC3-208ENST00000560098 CDH11P55287 796 aa15.36■□□□□ 0.05
CRTC3-208ENST00000560098 PDK3Q15120 406 aa15.36■□□□□ 0.05
CRTC3-208ENST00000560098 ABLIM2Q6H8Q1 611 aa15.36■□□□□ 0.05
CRTC3-208ENST00000560098 OR4F3Q6IEY1 312 aa15.36■□□□□ 0.05
CRTC3-208ENST00000560098 OLIG3Q7RTU3 272 aa15.36■□□□□ 0.05
CRTC3-208ENST00000560098 C16orf62Q7Z3J2 963 aa15.36■□□□□ 0.05
CRTC3-208ENST00000560098 MTDHQ86UE4 582 aaKnown RBP15.36■□□□□ 0.05
CRTC3-208ENST00000560098 ZNF433Q8N7K0 673 aaPredicted RBP15.36■□□□□ 0.05
CRTC3-208ENST00000560098 SLC25A43Q8WUT9 341 aaPredicted RBP15.36■□□□□ 0.05
CRTC3-208ENST00000560098 RADILQ96JH8 1075 aa15.36■□□□□ 0.05
CRTC3-208ENST00000560098 EXD2Q9NVH0 621 aa15.36■□□□□ 0.05
CRTC3-208ENST00000560098 ASIC5Q9NY37 505 aa15.36■□□□□ 0.05
CRTC3-208ENST00000560098 NOP53Q9NZM5 478 aaKnown RBP15.36■□□□□ 0.05
CRTC3-208ENST00000560098 EMC3Q9P0I2 261 aa15.36■□□□□ 0.05
CRTC3-208ENST00000560098 LGALS13Q9UHV8 139 aa15.36■□□□□ 0.05
CRTC3-208ENST00000560098 IGKV3D-15A0A087WSY6 115 aa15.35■□□□□ 0.05
CRTC3-208ENST00000560098 GOLGA8QA0A0J9YX86 632 aa15.35■□□□□ 0.05
CRTC3-208ENST00000560098 GOLGA8OA6NCC3 632 aa15.35■□□□□ 0.05
CRTC3-208ENST00000560098 GOLGA8NF8WBI6 632 aa15.35■□□□□ 0.05
CRTC3-208ENST00000560098 RNASET2O00584 256 aaKnown RBP15.35■□□□□ 0.05
CRTC3-208ENST00000560098 BPGMP07738 259 aa15.35■□□□□ 0.05
CRTC3-208ENST00000560098 NUDT17P0C025 328 aa15.35■□□□□ 0.05
CRTC3-208ENST00000560098 MAPK14Q16539 360 aa15.35■□□□□ 0.05
CRTC3-208ENST00000560098 FBXW9Q5XUX1 488 aa15.35■□□□□ 0.05
CRTC3-208ENST00000560098 MIPOL1Q8TD10 442 aa15.35■□□□□ 0.05
CRTC3-208ENST00000560098 OR51I1Q9H343 314 aa15.35■□□□□ 0.05
CRTC3-208ENST00000560098 PCDHGB4Q9UN71 923 aa15.35■□□□□ 0.05
CRTC3-208ENST00000560098 SPIN1Q9Y657 262 aaPredicted RBP15.35■□□□□ 0.05
CRTC3-208ENST00000560098 SONP18583 2426 aaKnown RBP15.35■□□□□ 0.05
CRTC3-208ENST00000560098 KIAA0513O60268 411 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 AGR2O95994 175 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 GUSBP08236 651 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 TFPIP10646 304 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 PGM1P36871 562 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 APOBEC1P41238 236 aaKnown RBP15.34■□□□□ 0.05
CRTC3-208ENST00000560098 CASP9P55211 416 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 IFFO1Q0D2I5 559 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 NRF1Q16656 503 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 SMU1Q2TAY7 513 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 ATAD3BQ5T9A4 648 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 AGAP6Q5VW22 663 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 TMEM108Q6UXF1 575 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 UBE2J2Q8N2K1 259 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 PIAS4Q8N2W9 510 aaPredicted RBP15.34■□□□□ 0.05
CRTC3-208ENST00000560098 FAM71CQ8NEG0 241 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 OR8J2Q8NGG1 315 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 OR4A15Q8NGL6 344 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 ZNF563Q8TA94 476 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 OIT3Q8WWZ8 545 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 ZHX1-C8orf76Q96EF9 292 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 CCDC106Q9BWC9 280 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 YAE1D1Q9NRH1 226 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 CHRNA9Q9UGM1 479 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 B3GALT5Q9Y2C3 310 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 SLC35A3Q9Y2D2 325 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 NOSIPQ9Y314 301 aaKnown RBP15.34■□□□□ 0.05
CRTC3-208ENST00000560098 CHD3Q12873 2000 aaKnown RBP15.34■□□□□ 0.05
CRTC3-208ENST00000560098 CUBNO60494 3623 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 MXRA5Q9NR99 2828 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 ZNF716A6NP11 495 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 ANKRD28O15084 1053 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 SSX4O60224 188 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 RAD51DO75771 328 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 IGHV3-9P01782 118 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 OR12D1P0DN82 309 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 PTNP21246 168 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 TYW3Q6IPR3 259 aaKnown RBP15.34■□□□□ 0.05
CRTC3-208ENST00000560098 XAGE5Q8WWM1 108 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 APH1AQ96BI3 265 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 ZIM3Q96PE6 472 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 CTPS2Q9NRF8 586 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 POLE3Q9NRF9 147 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 MGAT4BQ9UQ53 548 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 WDR45Q9Y484 360 aa15.34■□□□□ 0.05
CRTC3-208ENST00000560098 NUP214P35658 2090 aaPredicted RBP15.33■□□□□ 0.05
CRTC3-208ENST00000560098 CIB4A0PJX0 185 aa15.33■□□□□ 0.04
CRTC3-208ENST00000560098 BCAS1O75363 584 aaPredicted RBP15.33■□□□□ 0.04
CRTC3-208ENST00000560098 PMS2P2O95744 297 aa15.33■□□□□ 0.04
CRTC3-208ENST00000560098 CREB1P16220 341 aa15.33■□□□□ 0.04
CRTC3-208ENST00000560098 FKBP2P26885 142 aaKnown RBP15.33■□□□□ 0.04
CRTC3-208ENST00000560098 RYKP34925 604 aa15.33■□□□□ 0.04
CRTC3-208ENST00000560098 HMBOX1Q6NT76 420 aa15.33■□□□□ 0.04
CRTC3-208ENST00000560098 TNFAIP8L2Q6P589 184 aaPredicted RBP15.33■□□□□ 0.04
CRTC3-208ENST00000560098 KLHL17Q6TDP4 642 aa15.33■□□□□ 0.04
CRTC3-208ENST00000560098 GRINAQ7Z429 371 aa15.33■□□□□ 0.04
CRTC3-208ENST00000560098 ANKRD46Q86W74 232 aa15.33■□□□□ 0.04
CRTC3-208ENST00000560098 HIPK1Q86Z02 1210 aa15.33■□□□□ 0.04
CRTC3-208ENST00000560098 OR52N5Q8NH56 324 aa15.33■□□□□ 0.04
CRTC3-208ENST00000560098 PIGXQ8TBF5 258 aa15.33■□□□□ 0.04
CRTC3-208ENST00000560098 RAB8BQ92930 207 aa15.33■□□□□ 0.04
CRTC3-208ENST00000560098 ARL5BQ96KC2 179 aa15.33■□□□□ 0.04
CRTC3-208ENST00000560098 ADAD1Q96M93 576 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms