RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 HNRNPCL3B7ZW38 293 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 C5orf58C9J3I9 102 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 MSTNO14793 375 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 ANGPT2O15123 496 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 HNRNPCL1O60812 293 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 SS18L1O75177 396 aaPredicted RBP13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 HNRNPCL4P0DMR1 293 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 BMP2P12643 396 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 PRG2P13727 222 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 MTPNP58546 118 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 HOXC5Q00444 222 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 EPS8Q12929 822 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 GNA13Q14344 377 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 CAPRIN1Q14444 709 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 LIN52Q52LA3 116 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 C3orf33Q6P1S2 294 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 FCRLAQ7L513 359 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 GRINAQ7Z429 371 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 ADGRG3Q86Y34 549 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 KIF18BQ86Y91 864 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 CMIPQ8IY22 773 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 RNF128Q8TEB7 428 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 GMPPAQ96IJ6 420 aaPredicted RBP13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 GPATCH1Q9BRR8 931 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 SERINC1Q9NRX5 453 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 FOXD3Q9UJU5 478 aaPredicted RBP13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 NDUFAF1Q9Y375 327 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 EMC9Q9Y3B6 208 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 NOTCH2Q04721 2471 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 MPDZO75970 2070 aa13.25□□□□□ -0.29
RABGGTA-211ENST00000559850 TMED7-TICAM2A0A0A6YYA0 188 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 TMEM72A0PK05 275 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 TMEM247A6NEH6 219 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 FBP2O00757 339 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 SMAD9O15198 467 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 PGM3O95394 542 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 ARAFP10398 606 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 TACR3P29371 465 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 AQP1P29972 269 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 AGTR1P30556 359 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 MDH1P40925 334 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 ACAA2P42765 397 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 KCNJ5P48544 419 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 IRX1P78414 480 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 FADDQ13158 208 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 NFYCQ13952 458 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 POU4F3Q15319 338 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 SYT14P1Q58G82 188 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 RUNDC3AQ59EK9 446 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 ZNF311Q5JNZ3 666 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 EEF1A1P5Q5VTE0 462 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 NUFIP2Q7Z417 695 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 SERPINA11Q86U17 422 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 COMTD1Q86VU5 262 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 TUSC5Q8IXB3 177 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 CADM2Q8N3J6 435 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 CPNE4Q96A23 557 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 ZNF775Q96BV0 537 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 REXO5Q96IC2 774 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 ARL5BQ96KC2 179 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 TIGARQ9NQ88 270 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 TMEM45AQ9NWC5 275 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 THUMPD1Q9NXG2 353 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 CHRNA9Q9UGM1 479 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 OSGIN1Q9UJX0 560 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 TMED7Q9Y3B3 224 aa13.24□□□□□ -0.29
RABGGTA-211ENST00000559850 ZC3H12DA2A288 527 aaKnown RBP13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 EVPLLA8MZ36 301 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 SULT2B1O00204 365 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 FESP07332 822 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 PABPC4LP0CB38 370 aaKnown RBP13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 CD8BP10966 210 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 POU2F1P14859 743 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 CCKARP32238 428 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 APOBEC1P41238 236 aaKnown RBP13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 DIO1P49895 249 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 CDK6Q00534 326 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 SORDQ00796 357 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 KLF10Q13118 480 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 SCARB2Q14108 478 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 LARS2Q15031 903 aaKnown RBP13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 METTL21CQ5VZV1 264 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 ANKRD34AQ69YU3 496 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 ZNF550Q7Z398 422 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 OR6K3Q8NGY3 331 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 BBS10Q8TAM1 723 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 FAM222BQ8WU58 562 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 PMM1Q92871 262 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 ZNF300Q96RE9 604 aaPredicted RBP13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 SLC39A3Q9BRY0 314 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 SPATA9Q9BWV2 254 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 CCDC134Q9H6E4 229 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 BCL2L10Q9HD36 194 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 SAR1AQ9NR31 198 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 KLHL28Q9NXS3 571 aa13.23□□□□□ -0.29
RABGGTA-211ENST00000559850 HRNRQ86YZ3 2850 aaPredicted RBP13.22□□□□□ -0.29
RABGGTA-211ENST00000559850 SH3D21A4FU49 640 aa13.22□□□□□ -0.29
RABGGTA-211ENST00000559850 A6NNC1 897 aa13.22□□□□□ -0.29
RABGGTA-211ENST00000559850 TPST1O60507 370 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms