RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 RAB1BQ9H0U4 201 aa9.41□□□□□ -0.9
TRAF3-207ENST00000559734 TSPYL1Q9H0U9 437 aa9.41□□□□□ -0.9
TRAF3-207ENST00000559734 LPAR2Q9HBW0 351 aa9.41□□□□□ -0.9
TRAF3-207ENST00000559734 SLC17A5Q9NRA2 495 aa9.41□□□□□ -0.9
TRAF3-207ENST00000559734 SERINC1Q9NRX5 453 aa9.41□□□□□ -0.9
TRAF3-207ENST00000559734 MEGF8Q7Z7M0 2845 aa9.41□□□□□ -0.9
TRAF3-207ENST00000559734 KLF11O14901 512 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 AKAP10O43572 662 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 LILRA1O75019 489 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 SKAP2O75563 359 aaPredicted RBP9.4□□□□□ -0.9
TRAF3-207ENST00000559734 CRCPO75575 148 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 ENO1P06733 434 aaKnown RBP9.4□□□□□ -0.9
TRAF3-207ENST00000559734 ERCC1P07992 297 aaPredicted RBP9.4□□□□□ -0.9
TRAF3-207ENST00000559734 IFI6P09912 130 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 SBK3P0C264 359 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 OR4A8P0C604 315 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 IFNGR1P15260 489 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 MAGEA12P43365 314 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 PRPS1P60891 318 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 MERTKQ12866 999 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 SCGB2A2Q13296 93 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 CBFBQ13951 182 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 LASP1Q14847 261 aaKnown RBP9.4□□□□□ -0.9
TRAF3-207ENST00000559734 ZSWIM7Q19AV6 140 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 TIGD2Q4W5G0 525 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 ZNF385BQ569K4 471 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 AWAT1Q58HT5 328 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.4□□□□□ -0.9
TRAF3-207ENST00000559734 NOXRED1Q6NXP6 359 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 TMPPEQ6ZT21 453 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 SVOPLQ8N434 492 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 OR5W2Q8NH69 310 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 FAM216AQ8WUB2 273 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 PPCDCQ96CD2 204 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 EGLN2Q96KS0 407 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 RBM4Q9BWF3 364 aaKnown RBP9.4□□□□□ -0.9
TRAF3-207ENST00000559734 NARFLQ9H6Q4 476 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 MID1IP1Q9NPA3 183 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 CA10Q9NS85 328 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 SIRT5Q9NXA8 310 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 SH3BP4Q9P0V3 963 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 MALT1Q9UDY8 824 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 PCDHB10Q9UN67 800 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 ACTL7BQ9Y614 415 aa9.4□□□□□ -0.9
TRAF3-207ENST00000559734 IGKV3D-15A0A087WSY6 115 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 ZNF716A6NP11 495 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 B9A039 149 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 HSPA4LO95757 839 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 WNT11O96014 354 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 TACSTD2P09758 323 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 UBL4AP11441 157 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 PGCP20142 388 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 NTF4P34130 210 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 SERPINB9P50453 376 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 IDH3GP51553 393 aaPredicted RBP9.39□□□□□ -0.91
TRAF3-207ENST00000559734 FOXA1P55317 472 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 LCP2Q13094 533 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 KLHL26Q53HC5 615 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 SYT14P1Q58G82 188 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 PRR31Q5SQ13 230 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 DCST2Q5T1A1 773 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 MTDHQ86UE4 582 aaKnown RBP9.39□□□□□ -0.91
TRAF3-207ENST00000559734 ZCCHC24Q8N2G6 241 aaKnown RBP9.39□□□□□ -0.91
TRAF3-207ENST00000559734 C17orf78Q8N4C9 275 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 PIGXQ8TBF5 258 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 PAFAH2Q99487 392 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 THUMPD3Q9BV44 507 aaKnown RBP9.39□□□□□ -0.91
TRAF3-207ENST00000559734 HOXD1Q9GZZ0 328 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 DYNLRB1Q9NP97 96 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 ZCCHC3Q9NUD5 404 aaKnown RBP9.39□□□□□ -0.91
TRAF3-207ENST00000559734 ZNF180Q9UJW8 692 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 STK38LQ9Y2H1 464 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 PCDHB14Q9Y5E9 798 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 PCDHGB1Q9Y5G3 927 aa9.39□□□□□ -0.91
TRAF3-207ENST00000559734 SH3PXD2BA1X283 911 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 B4DSR2 109 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 TRIM49D1C9J1S8 452 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 POC1B-GALNT4F8VUJ3 575 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 LYNX1G3V0Z9 82 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 GPR171O14626 319 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 TMPRSS2O15393 492 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 ZNF264O43296 627 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 HMGN2P05204 90 aaKnown RBP9.38□□□□□ -0.91
TRAF3-207ENST00000559734 LYNX1P0DP58 116 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 DDX5P17844 614 aaKnown RBP9.38□□□□□ -0.91
TRAF3-207ENST00000559734 GIFP27352 417 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 SLC1A3P43003 542 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 PPOXP50336 477 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 ATP12AP54707 1039 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 PKNOX1P55347 436 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 OR2B6P58173 313 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 TGFBR3Q03167 851 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 PDK3Q15120 406 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 ADIPOQQ15848 244 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 MIDNQ504T8 468 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 HIKESHIQ53FT3 197 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 SLC25A53Q5H9E4 307 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 TSPO2Q5TGU0 170 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 ZCCHC12Q6PEW1 402 aa9.38□□□□□ -0.91
TRAF3-207ENST00000559734 CCDC103Q8IW40 242 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms