RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 LNX2Q8N448 690 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 TMCO5AQ8N6Q1 288 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 OR5W2Q8NH69 310 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 THAP3Q8WTV1 239 aaPredicted RBP11.59□□□□□ -0.55
USP3-213ENST00000559711 HGDQ93099 445 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 ZNF524Q96C55 264 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 IMMP1LQ96LU5 166 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 TSC22D3Q99576 134 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 TMEM43Q9BTV4 400 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 ENKD1Q9H0I2 346 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 MRPS18AQ9NVS2 196 aaKnown RBP11.59□□□□□ -0.55
USP3-213ENST00000559711 TOR4AQ9NXH8 423 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 MYOTQ9UBF9 498 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 PADI1Q9ULC6 663 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 PCDHGA3Q9Y5H0 932 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 HS3ST3B1Q9Y662 390 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 IGKV1D-42A0A075B6H8 117 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 KDM4EB2RXH2 506 aaPredicted RBP11.59□□□□□ -0.55
USP3-213ENST00000559711 WWP2O00308 870 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 PRODHO43272 600 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 LRP3O75074 770 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 CSO75390 466 aaKnown RBP11.59□□□□□ -0.55
USP3-213ENST00000559711 TRMUO75648 421 aaKnown RBP11.59□□□□□ -0.55
USP3-213ENST00000559711 DLGAP3O95886 979 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 MT-CO3P00414 261 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 DBTP11182 482 aaKnown RBP11.59□□□□□ -0.55
USP3-213ENST00000559711 GRK5P34947 590 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 CCR4P51679 360 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 AADACL4Q5VUY2 407 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 RNLSQ5VYX0 342 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 LYPD8Q6UX82 237 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 C6orf15Q6UXA7 325 aaPredicted RBP11.59□□□□□ -0.55
USP3-213ENST00000559711 RTL4Q6ZR62 310 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 NUP54Q7Z3B4 507 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 OAFQ86UD1 273 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 LSRQ86X29 649 aaPredicted RBP11.59□□□□□ -0.55
USP3-213ENST00000559711 CYP4Z2PQ8N1L4 340 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 OR52L1Q8NGH7 329 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 OR13C2Q8NGS9 318 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 C9orf43Q8TAL5 461 aaPredicted RBP11.59□□□□□ -0.55
USP3-213ENST00000559711 TTC9Q92623 222 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 C12orf43Q96C57 262 aaKnown RBP11.59□□□□□ -0.55
USP3-213ENST00000559711 TMCO6Q96DC7 493 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 SGTBQ96EQ0 304 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 SH3YL1Q96HL8 342 aaPredicted RBP11.59□□□□□ -0.55
USP3-213ENST00000559711 TNFRSF13CQ96RJ3 184 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 KLHDC3Q9BQ90 382 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 IL20RAQ9UHF4 553 aa11.59□□□□□ -0.55
USP3-213ENST00000559711 ELOA3DA6NLF2 546 aaPredicted RBP11.58□□□□□ -0.56
USP3-213ENST00000559711 SNTNA6NMZ2 147 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 PLD2O14939 933 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 IGHEP01854 428 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 ADRA2AP08913 450 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 RAB40ALP0C0E4 278 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 JMJD7P0C870 316 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 COX6A1P12074 109 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 PGCP20142 388 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 SLC9A3P48764 834 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 ST13P50502 369 aaKnown RBP11.58□□□□□ -0.56
USP3-213ENST00000559711 P2RX1P51575 399 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 FBXW4P57775 412 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 EIF3IQ13347 325 aaKnown RBP11.58□□□□□ -0.56
USP3-213ENST00000559711 EXT1Q16394 746 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 TMEM44Q2T9K0 475 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 ELOA3BQ3SY89 546 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 THSD4Q6ZMP0 1018 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 CCDC81Q6ZN84 652 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 PIP4P1Q86T03 277 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 ANKRD13BQ86YJ7 626 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 SLC15A4Q8N697 577 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 ANKK1Q8NFD2 765 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 ELOA3Q8NG57 546 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 OR51A7Q8NH64 312 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 M1APQ8TC57 530 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 LIPHQ8WWY8 451 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 CRELD1Q96HD1 420 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 DEFB126Q9BYW3 111 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 NAA50Q9GZZ1 169 aaKnown RBP11.58□□□□□ -0.56
USP3-213ENST00000559711 MCCC2Q9HCC0 563 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 PARD6AQ9NPB6 346 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 PISDQ9UG56 409 aa11.58□□□□□ -0.56
USP3-213ENST00000559711 ZNF318Q5VUA4 2279 aa11.57□□□□□ -0.56
USP3-213ENST00000559711 TRAV27A0A087WT01 109 aa11.57□□□□□ -0.56
USP3-213ENST00000559711 CCDC187A0A096LP49 1063 aa11.57□□□□□ -0.56
USP3-213ENST00000559711 A0A1W2PNU3 283 aaPredicted RBP11.57□□□□□ -0.56
USP3-213ENST00000559711 PMS2P1A4D2B8 440 aa11.57□□□□□ -0.56
USP3-213ENST00000559711 C9orf172C9J069 976 aa11.57□□□□□ -0.56
USP3-213ENST00000559711 H3BMQ9 156 aa11.57□□□□□ -0.56
USP3-213ENST00000559711 GNB5O14775 395 aa11.57□□□□□ -0.56
USP3-213ENST00000559711 DKK1O94907 266 aa11.57□□□□□ -0.56
USP3-213ENST00000559711 CH25HO95992 272 aa11.57□□□□□ -0.56
USP3-213ENST00000559711 LCKP06239 509 aa11.57□□□□□ -0.56
USP3-213ENST00000559711 FBXO45P0C2W1 286 aa11.57□□□□□ -0.56
USP3-213ENST00000559711 TGM1P22735 817 aa11.57□□□□□ -0.56
USP3-213ENST00000559711 PCSK6P29122 969 aa11.57□□□□□ -0.56
USP3-213ENST00000559711 HOXD11P31277 338 aaPredicted RBP11.57□□□□□ -0.56
USP3-213ENST00000559711 FOLR3P41439 243 aa11.57□□□□□ -0.56
USP3-213ENST00000559711 TMED10P49755 219 aaKnown RBP11.57□□□□□ -0.56
USP3-213ENST00000559711 GAS1P54826 345 aa11.57□□□□□ -0.56
USP3-213ENST00000559711 CLDN6P56747 220 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms