RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 RAB43Q86YS6 212 aa13.03□□□□□ -0.32
RABGGTA-209ENST00000559551 ZNF440Q8IYI8 595 aa13.03□□□□□ -0.32
RABGGTA-209ENST00000559551 TMCO5AQ8N6Q1 288 aa13.03□□□□□ -0.32
RABGGTA-209ENST00000559551 TMEM239Q8WW34 195 aa13.03□□□□□ -0.32
RABGGTA-209ENST00000559551 UBE2FQ969M7 185 aa13.03□□□□□ -0.32
RABGGTA-209ENST00000559551 DSN1Q9H410 356 aa13.03□□□□□ -0.32
RABGGTA-209ENST00000559551 IGKV1D-42A0A075B6H8 117 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 A0A087WXM4 84 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 GNB5O14775 395 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 SPINK2P20155 84 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 MAKP20794 623 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 CHMP24386 653 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 CASP3P42574 277 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 GPR4P46093 362 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 ISL1P61371 349 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 RPP38P78345 283 aaKnown RBP13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 CBX3Q13185 183 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 ZNF691Q5VV52 312 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 TMEM236Q5W0B7 351 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 ULK3Q6PHR2 472 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 CD300LDQ6UXZ3 194 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 GPR141Q7Z602 305 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 ATG4DQ86TL0 474 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 ZNF227Q86WZ6 799 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 TMCO6Q96DC7 493 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 PLA2G12AQ9BZM1 189 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 UCK2Q9BZX2 261 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 BLOC1S6Q9UL45 172 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 WASF3Q9UPY6 502 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 ORC6Q9Y5N6 252 aa13.02□□□□□ -0.33
RABGGTA-209ENST00000559551 TRIM64CA6NLI5 447 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 KPNA4O00629 521 aaPredicted RBP13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 BCKDKO14874 412 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 CCL3P10147 92 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 ICAM2P13598 275 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 TMED10P49755 219 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 SSR4P51571 173 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 COL28A1Q2UY09 1125 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 TTC23Q5W5X9 447 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 TOR1AIP2Q8NFQ8 470 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 GPR119Q8TDV5 335 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 THOC3Q96J01 351 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 HRASLS5Q96KN8 279 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 PAIP2BQ9ULR5 123 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 CEP295Q9C0D2 2601 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 A0A087WUJ7 227 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 IFNA8P32881 189 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 P2RX1P51575 399 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 CRISP1P54107 249 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 FXYD6P3P58550 94 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 PRKCDQ05655 676 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 CD47Q08722 323 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 CLN3Q13286 438 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 PTGES3Q15185 160 aaKnown RBP13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 ZBED5Q49AG3 693 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 PRAMEF20Q5VT98 475 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 WBP2NLQ6ICG8 309 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 LINC00471Q8N535 108 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 ZNF555Q8NEP9 628 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 OR8D4Q8NGM9 314 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 OR5W2Q8NH69 310 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 PIGXQ8TBF5 258 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 FBLIM1Q8WUP2 373 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 ADAM19Q9H013 955 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 EGLN3Q9H6Z9 239 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 ZNF556Q9HAH1 456 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 TBC1D23Q9NUY8 699 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 ANKRD10Q9NXR5 420 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 MED11Q9P086 117 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 APC2O95996 2303 aa13.01□□□□□ -0.33
RABGGTA-209ENST00000559551 M0R129 80 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 NKX2-8O15522 239 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 OSMP13725 252 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 ELK4P28324 431 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 TTKP33981 857 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 EGR4Q05215 589 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 TSPAN31Q12999 210 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 FHL1Q13642 323 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 KEAP1Q14145 624 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 ACER2Q5QJU3 275 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 OPN5Q6U736 354 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 MDGA2Q7Z553 956 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 GNPDA2Q8TDQ7 276 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 SNRNP27Q8WVK2 155 aaKnown RBP13□□□□□ -0.33
RABGGTA-209ENST00000559551 ASB15Q8WXK1 588 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 FRMD6Q96NE9 622 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 DPH1Q9BZG8 443 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 KLRF1Q9NZS2 232 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 LAMA5O15230 3695 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 IGLV3-32A0A0A0MS00 114 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 ZAR1LA6NP61 321 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 FPR3P25089 353 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 CTBP2P56545 445 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 MEP1AQ16819 746 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 BEST3Q8N1M1 668 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 WDSUB1Q8N9V3 476 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 PAQR8Q8TEZ7 354 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 DNAJA4Q8WW22 397 aaPredicted RBP13□□□□□ -0.33
RABGGTA-209ENST00000559551 TMIGD2Q96BF3 282 aa13□□□□□ -0.33
RABGGTA-209ENST00000559551 ENKD1Q9H0I2 346 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms