RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 A0A0G2JNJ9 132 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 EIF1AYO14602 144 aaKnown RBP18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 LGI1O95970 557 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 T-ENOLP0DO92 83 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 CD247P20963 164 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 ME2P23368 584 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 CEACAM8P31997 349 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 SFTPDP35247 375 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 APOBEC1P41238 236 aaKnown RBP18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 SLC1A3P43003 542 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 ZNF136P52737 540 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 SMSP52788 366 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 SELENBP1Q13228 472 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 RIPPLY2Q5TAB7 128 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 POMZP3Q6PJE2 187 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 ESPNLQ6ZVH7 1005 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 LACC1Q8IV20 430 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 CCDC71Q8IV32 467 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 TNIP2Q8NFZ5 429 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 ZNF845Q96IR2 970 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 KLHL15Q96M94 604 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 PRR14Q9BWN1 585 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 CLCF1Q9UBD9 225 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 Q9UFV3 132 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 OSGIN1Q9UJX0 560 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 PRDM4Q9UKN5 801 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 RNF6Q9Y252 685 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 MBD3L4A6NDZ8 208 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 MBD3L3A6NE82 208 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 MBD3L5A6NJ08 208 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 TNFSF11O14788 317 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 TGM6O95932 706 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 TACR3P29371 465 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 KDELR2P33947 212 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 TIMP3P35625 211 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 CDSNQ15517 529 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 CHMP1BQ7LBR1 199 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 CADM2Q8N3J6 435 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 ZNF808Q8N4W9 903 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 C9orf106Q8NAJ2 232 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 OR2V1Q8NHB1 315 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 MBD3L2Q8NHZ7 208 aaPredicted RBP18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 FIG4Q92562 907 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 WNT2BQ93097 391 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 SDCCAG3Q96C92 435 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 ALG2Q9H553 416 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 SPAG4Q9NPE6 437 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 SERINC1Q9NRX5 453 aa18.23■□□□□ 0.51
TSPAN3-207ENST00000559494 PTPN13Q12923 2485 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 CACNA1CQ13936 2221 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 TMED7-TICAM2A0A0A6YYA0 188 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 B2RBV5 119 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 TMEM229AB2RXF0 380 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 CXCL13O43927 109 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 TPST2O60704 377 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 C8BP07358 591 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 UQCRBP14927 111 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 HTR3AP46098 478 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 EIF1AXP47813 144 aaKnown RBP18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 RPS3AP61247 264 aaKnown RBP18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 COPZ1P61923 177 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 WBP2NLQ6ICG8 309 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 XKRXQ6PP77 449 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 TRPM8Q7Z2W7 1104 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 PGAM4Q8N0Y7 254 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 NAXEQ8NCW5 288 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 OR10D3Q8NH80 312 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 SLC26A7Q8TE54 656 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 OSTF1Q92882 214 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 ARHGDIGQ99819 225 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 KLHL28Q9NXS3 571 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 ADA2Q9NZK5 511 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 PACSIN3Q9UKS6 424 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 TMED7Q9Y3B3 224 aa18.22■□□□□ 0.51
TSPAN3-207ENST00000559494 MPDZO75970 2070 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 UTP20O75691 2785 aaKnown RBP18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 A0A1W2PNR3 127 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 SYT5O00445 386 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 FESP07332 822 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 CCNA2P20248 432 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 AGAP20933 346 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 HTR2AP28223 471 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 CPOXP36551 454 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 MNAT1P51948 309 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 POLR2HP52434 150 aaKnown RBP18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 CARD18P57730 90 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 SGCBQ16585 318 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 NRF1Q16656 503 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 HBMQ6B0K9 141 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 C3orf33Q6P1S2 294 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 OR4D11Q8NGI4 311 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 PSMG3-AS1Q96PY0 264 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 COQ10BQ9H8M1 238 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 CHRNA9Q9UGM1 479 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 SLC13A4Q9UKG4 626 aa18.21■□□□□ 0.51
TSPAN3-207ENST00000559494 TMEM72A0PK05 275 aa18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 GJE1A6NN92 205 aa18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 M0R3H8 397 aa18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 IL2RAP01589 272 aa18.2■□□□□ 0.5
TSPAN3-207ENST00000559494 RGS8P57771 180 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms