RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 MKLN1Q9UL63 735 aa14.07□□□□□ -0.16
SCFD1-224ENST00000557713 RTTNQ86VV8 2226 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 A0A096LNT2 108 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 TLDC2A0PJX2 215 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 ZNF716A6NP11 495 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 E7EQL1 145 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 SULT2B1O00204 365 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 SSX4O60224 188 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 STX11O75558 287 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 CYP7B1O75881 506 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 AK1P00568 194 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 CSTAP01040 98 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 PGCP20142 388 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 NTF4P34130 210 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 CDH11P55287 796 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 CLDN8P56748 225 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 CSNK2A1P68400 391 aaPredicted RBP14.06□□□□□ -0.16
SCFD1-224ENST00000557713 MERTKQ12866 999 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 MAPK14Q16539 360 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 NRF1Q16656 503 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 SYT14P1Q58G82 188 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 AGAP6Q5VW22 663 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 FBXW9Q5XUX1 488 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 ABLIM2Q6H8Q1 611 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 C11orf71Q6IPW1 123 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 PODNL1Q6PEZ8 512 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 CLECL1Q8IZS7 167 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 OR2W6PQ8NHA6 318 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 TMEM234Q8WY98 164 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 ZNF350Q9GZX5 532 aa14.06□□□□□ -0.16
SCFD1-224ENST00000557713 SONP18583 2426 aaKnown RBP14.06□□□□□ -0.16
SCFD1-224ENST00000557713 IGHV4-30-2A0A087WSY4 118 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 GPRIN2O60269 458 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 SPAG7O75391 227 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 SKAP2O75563 359 aaPredicted RBP14.05□□□□□ -0.16
SCFD1-224ENST00000557713 GUSBP08236 651 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 UBTFL6P0CB48 400 aaPredicted RBP14.05□□□□□ -0.16
SCFD1-224ENST00000557713 TTKP33981 857 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 SOAT1P35610 550 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 PGM1P36871 562 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 APOBEC1P41238 236 aaKnown RBP14.05□□□□□ -0.16
SCFD1-224ENST00000557713 IRX1P78414 480 aaPredicted RBP14.05□□□□□ -0.16
SCFD1-224ENST00000557713 EMX2Q04743 252 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 PGS1Q32NB8 556 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 OR4F3Q6IEY1 312 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 EIF3MQ7L2H7 374 aaKnown RBP14.05□□□□□ -0.16
SCFD1-224ENST00000557713 FAM71CQ8NEG0 241 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 OR10H5Q8NGA6 315 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 MIPOL1Q8TD10 442 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 TCP10LQ8TDR4 215 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 SLC25A43Q8WUT9 341 aaPredicted RBP14.05□□□□□ -0.16
SCFD1-224ENST00000557713 TUBGCP3Q96CW5 907 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 RHNO1Q9BSD3 238 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 CCDC106Q9BWC9 280 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 ASIC5Q9NY37 505 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 EMC3Q9P0I2 261 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 MGAT4BQ9UQ53 548 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 SLC25A15Q9Y619 301 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 CADP27708 2225 aa14.05□□□□□ -0.16
SCFD1-224ENST00000557713 NUP214P35658 2090 aaPredicted RBP14.04□□□□□ -0.16
SCFD1-224ENST00000557713 A8MV72 311 aaPredicted RBP14.04□□□□□ -0.16
SCFD1-224ENST00000557713 BCAS1O75363 584 aaPredicted RBP14.04□□□□□ -0.16
SCFD1-224ENST00000557713 RAD51DO75771 328 aa14.04□□□□□ -0.16
SCFD1-224ENST00000557713 IFNA2P01563 188 aa14.04□□□□□ -0.16
SCFD1-224ENST00000557713 IGHV3-9P01782 118 aa14.04□□□□□ -0.16
SCFD1-224ENST00000557713 PTAFRP25105 342 aa14.04□□□□□ -0.16
SCFD1-224ENST00000557713 MAD2L1Q13257 205 aaPredicted RBP14.04□□□□□ -0.16
SCFD1-224ENST00000557713 SMU1Q2TAY7 513 aa14.04□□□□□ -0.16
SCFD1-224ENST00000557713 TMEM108Q6UXF1 575 aa14.04□□□□□ -0.16
SCFD1-224ENST00000557713 RIBC1Q8N443 379 aaPredicted RBP14.04□□□□□ -0.16
SCFD1-224ENST00000557713 OIT3Q8WWZ8 545 aa14.04□□□□□ -0.16
SCFD1-224ENST00000557713 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.04□□□□□ -0.16
SCFD1-224ENST00000557713 SLC35G5Q96KT7 338 aa14.04□□□□□ -0.16
SCFD1-224ENST00000557713 ADAD1Q96M93 576 aaKnown RBP14.04□□□□□ -0.16
SCFD1-224ENST00000557713 MUS81Q96NY9 551 aa14.04□□□□□ -0.16
SCFD1-224ENST00000557713 DHRS9Q9BPW9 319 aa14.04□□□□□ -0.16
SCFD1-224ENST00000557713 CACNG6Q9BXT2 260 aa14.04□□□□□ -0.16
SCFD1-224ENST00000557713 SAP130Q9H0E3 1048 aa14.04□□□□□ -0.16
SCFD1-224ENST00000557713 OR51I1Q9H343 314 aa14.04□□□□□ -0.16
SCFD1-224ENST00000557713 CTPS2Q9NRF8 586 aa14.04□□□□□ -0.16
SCFD1-224ENST00000557713 CBLN4Q9NTU7 201 aa14.04□□□□□ -0.16
SCFD1-224ENST00000557713 EXD2Q9NVH0 621 aa14.04□□□□□ -0.16
SCFD1-224ENST00000557713 NOSIPQ9Y314 301 aaKnown RBP14.04□□□□□ -0.16
SCFD1-224ENST00000557713 RNF103-CHMP3A0A140T963 221 aa14.03□□□□□ -0.16
SCFD1-224ENST00000557713 CIB4A0PJX0 185 aa14.03□□□□□ -0.16
SCFD1-224ENST00000557713 FAM234BA2RU67 622 aa14.03□□□□□ -0.16
SCFD1-224ENST00000557713 RNF212BA8MTL3 300 aa14.03□□□□□ -0.16
SCFD1-224ENST00000557713 RNASET2O00584 256 aaKnown RBP14.03□□□□□ -0.16
SCFD1-224ENST00000557713 GPR171O14626 319 aa14.03□□□□□ -0.16
SCFD1-224ENST00000557713 KIAA0513O60268 411 aa14.03□□□□□ -0.16
SCFD1-224ENST00000557713 SCN2BO60939 215 aa14.03□□□□□ -0.16
SCFD1-224ENST00000557713 PMS2P2O95744 297 aa14.03□□□□□ -0.16
SCFD1-224ENST00000557713 OR12D1P0DN82 309 aa14.03□□□□□ -0.16
SCFD1-224ENST00000557713 TFPIP10646 304 aa14.03□□□□□ -0.16
SCFD1-224ENST00000557713 CD40P25942 277 aa14.03□□□□□ -0.16
SCFD1-224ENST00000557713 CLK1P49759 484 aaKnown RBP14.03□□□□□ -0.16
SCFD1-224ENST00000557713 ZNF83P51522 516 aa14.03□□□□□ -0.16
SCFD1-224ENST00000557713 SLC16A1P53985 500 aa14.03□□□□□ -0.16
SCFD1-224ENST00000557713 CASP9P55211 416 aa14.03□□□□□ -0.16
SCFD1-224ENST00000557713 GABRA6Q16445 453 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms