RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 SLC25A3Q00325 362 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 SKP2Q13309 424 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 CBFBQ13951 182 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 NRF1Q16656 503 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 UGT3A2Q3SY77 523 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 ABLIM2Q6H8Q1 611 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 CLECL1Q8IZS7 167 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 MUC15Q8N387 334 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 OR56A1Q8NGH5 318 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 UBLCP1Q8WVY7 318 aaPredicted RBP12.39□□□□□ -0.43
SLIRP-210ENST00000557431 OR5P2Q8WZ92 322 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 MTERF3Q96E29 417 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 ARL5BQ96KC2 179 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 ADAD1Q96M93 576 aaKnown RBP12.39□□□□□ -0.43
SLIRP-210ENST00000557431 OR11A1Q9GZK7 315 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 HOXD1Q9GZZ0 328 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 CHODLQ9H9P2 273 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 CTPS2Q9NRF8 586 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 SLC25A15Q9Y619 301 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 DYSFO75923 2080 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 SVEP1Q4LDE5 3571 aa12.39□□□□□ -0.43
SLIRP-210ENST00000557431 ZNF716A6NP11 495 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 ZNF724A8MTY0 619 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 UGT2B17O75795 530 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 HSPA4LO95757 839 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 CHEK2O96017 543 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 C1QCP02747 245 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 IGHV4-31P0DP07 118 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 KRT4P19013 534 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 CD40P25942 277 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 ALDH3A1P30838 453 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 RYKP34925 604 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 CCT5P48643 541 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 FABP6P51161 128 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 HBA1P69905 142 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 MAPK14Q16539 360 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 SYT14P1Q58G82 188 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 ARL13AQ5H913 290 aaPredicted RBP12.38□□□□□ -0.43
SLIRP-210ENST00000557431 IL23RQ5VWK5 629 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 TMPPEQ6ZT21 453 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 CCDC103Q8IW40 242 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 FBXL14Q8N1E6 418 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 EIF1ADQ8N9N8 165 aaKnown RBP12.38□□□□□ -0.43
SLIRP-210ENST00000557431 DHRS9Q9BPW9 319 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 BEX2Q9BXY8 128 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 GRIP2Q9C0E4 1043 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 NOSIPQ9Y314 301 aaKnown RBP12.38□□□□□ -0.43
SLIRP-210ENST00000557431 TMED5Q9Y3A6 229 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 ATP23Q9Y6H3 246 aa12.38□□□□□ -0.43
SLIRP-210ENST00000557431 SLC35F4A4IF30 521 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 CLDN24A6NM45 220 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 EIF4E2O60573 245 aaKnown RBP12.37□□□□□ -0.43
SLIRP-210ENST00000557431 TRIM13O60858 407 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 CSTAP01040 98 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 ITGA5P08648 1049 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 DHRS4L1P0CG22 281 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 MATN1P21941 496 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 IGFBP5P24593 272 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 VLDLRP98155 873 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 LOXL1Q08397 574 aaPredicted RBP12.37□□□□□ -0.43
SLIRP-210ENST00000557431 RAB35Q15286 201 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 XKR7Q5GH72 579 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 FBXW9Q5XUX1 488 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 OR4F3Q6IEY1 312 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 TMEM108Q6UXF1 575 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 RNF165Q6ZSG1 346 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 PSMA8Q8TAA3 256 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 SFXN5Q8TD22 340 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 FAM168AQ92567 244 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 RAB8BQ92930 207 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 APH1AQ96BI3 265 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 C3orf49Q96BT1 292 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 RADILQ96JH8 1075 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 SLC35G5Q96KT7 338 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 PPP1R36Q96LQ0 422 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 LAT2Q9GZY6 243 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 SLC17A7Q9P2U7 560 aa12.37□□□□□ -0.43
SLIRP-210ENST00000557431 GOLGA8QA0A0J9YX86 632 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 GOLGA8OA6NCC3 632 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 ELOA3DA6NLF2 546 aaPredicted RBP12.36□□□□□ -0.43
SLIRP-210ENST00000557431 TMEM114B3SHH9 223 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 GOLGA8NF8WBI6 632 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 ETV2O00321 342 aaPredicted RBP12.36□□□□□ -0.43
SLIRP-210ENST00000557431 ZNF500O60304 480 aaPredicted RBP12.36□□□□□ -0.43
SLIRP-210ENST00000557431 SPAG7O75391 227 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 DDX5P17844 614 aaKnown RBP12.36□□□□□ -0.43
SLIRP-210ENST00000557431 PLAURQ03405 335 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 GGTLC2Q14390 218 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 GABRA6Q16445 453 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 PGS1Q32NB8 556 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 ELOA3BQ3SY89 546 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 C6orf136Q5SQH8 315 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 C6orf120Q7Z4R8 191 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 WDR31Q8NA23 367 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 FNDC5Q8NAU1 212 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 ELOA3Q8NG57 546 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 ZNF563Q8TA94 476 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 C10orf105Q8TEF2 133 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 ST8SIA1Q92185 356 aa12.36□□□□□ -0.43
SLIRP-210ENST00000557431 PPP3R2Q96LZ3 170 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms