RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 TRMOQ9BU70 441 aa7.91□□□□□ -1.14
HNRNPC-227ENST00000556897 PLA2G12AQ9BZM1 189 aa7.91□□□□□ -1.14
HNRNPC-227ENST00000556897 FKRPQ9H9S5 495 aa7.91□□□□□ -1.14
HNRNPC-227ENST00000556897 C1orf109Q9NX04 203 aa7.91□□□□□ -1.14
HNRNPC-227ENST00000556897 MALT1Q9UDY8 824 aa7.91□□□□□ -1.14
HNRNPC-227ENST00000556897 NOSIPQ9Y314 301 aaKnown RBP7.91□□□□□ -1.14
HNRNPC-227ENST00000556897 DTNAQ9Y4J8 743 aa7.91□□□□□ -1.14
HNRNPC-227ENST00000556897 FKBP7Q9Y680 259 aa7.91□□□□□ -1.14
HNRNPC-227ENST00000556897 KCNE3Q9Y6H6 103 aa7.91□□□□□ -1.14
HNRNPC-227ENST00000556897 A0A087WUV0 522 aaPredicted RBP7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 LOC390937A0A1W2PQ73 354 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 LRP5LA4QPB2 252 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 ZNF716A6NP11 495 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 G3V2L1 256 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 SPRY1O43609 319 aaPredicted RBP7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 EIF4E2O60573 245 aaKnown RBP7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 CYP7B1O75881 506 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 UROSP10746 265 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 UBL4AP11441 157 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 ITGA2P17301 1181 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 CFPP27918 469 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 GCAP28676 217 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 CASQ1P31415 396 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 SESN3P58005 492 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 RPL38P63173 70 aaKnown RBP7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 CSNK2A1P68400 391 aaPredicted RBP7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 SLC25A3Q00325 362 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 MERTKQ12866 999 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 SKP2Q13309 424 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 TP53BP2Q13625 1128 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 MLC1Q15049 377 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 PDK3Q15120 406 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 SWI5Q1ZZU3 235 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 RFTN2Q52LD8 501 aaPredicted RBP7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 SYT14P1Q58G82 188 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 C9orf135Q5VTT2 229 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 OR7E24Q6IFN5 339 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 ZYG11AQ6WRX3 759 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 C12orf54Q6X4T0 127 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 FRMD7Q6ZUT3 714 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 ZNF572Q7Z3I7 529 aaPredicted RBP7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 MTDHQ86UE4 582 aaKnown RBP7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 MEX3DQ86XN8 651 aaKnown RBP7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 RFLNBQ8N5W9 214 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 ANKS4BQ8N8V4 417 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 OR52E4Q8NGH9 312 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 OR2T11Q8NH01 316 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 ADAMTS15Q8TE58 950 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 IFT81Q8WYA0 676 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 ARL8AQ96BM9 186 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 DNAJA3Q96EY1 480 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 FMO2Q99518 471 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 THUMPD3Q9BV44 507 aaKnown RBP7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 ACTRT3Q9BYD9 372 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 BPESC1Q9GZL8 116 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 TSPYL1Q9H0U9 437 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 C12orf65Q9H3J6 166 aaKnown RBP7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 SERINC1Q9NRX5 453 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 GPATCH2Q9NW75 528 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 EMCNQ9ULC0 261 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 FAF1Q9UNN5 650 aaPredicted RBP7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 MOKQ9UQ07 419 aa7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.9□□□□□ -1.14
HNRNPC-227ENST00000556897 TENM1Q9UKZ4 2725 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 SERINC4A6NH21 518 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 H3BQF6 201 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 PDLIM1O00151 329 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 SLC28A1O00337 649 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 DNAJA2O60884 412 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 MRPL33O75394 65 aaKnown RBP7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 TFPIP10646 304 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 MYL2P10916 166 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 ZNF23P17027 643 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 ECHS1P30084 290 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 CCT3P49368 545 aaKnown RBP7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 SNRPD2P62316 118 aaKnown RBP7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 CFAP157Q5JU67 520 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 PDZK1Q5T2W1 519 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 BLOC1S3Q6QNY0 202 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 SLC46A3Q7Z3Q1 461 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 CCDC103Q8IW40 242 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 OR5D16Q8NGK9 328 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 TMEM234Q8WY98 164 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 ST8SIA1Q92185 356 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 CCDC126Q96EE4 140 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 FCRL1Q96LA6 429 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 VRK1Q99986 396 aaPredicted RBP7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 KCNE5Q9UJ90 142 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 FIS1Q9Y3D6 152 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 DYSFO75923 2080 aa7.89□□□□□ -1.15
HNRNPC-227ENST00000556897 CENPVL1A0A0U1RR11 272 aa7.88□□□□□ -1.15
HNRNPC-227ENST00000556897 GPR171O14626 319 aa7.88□□□□□ -1.15
HNRNPC-227ENST00000556897 SLU7O95391 586 aaKnown RBP7.88□□□□□ -1.15
HNRNPC-227ENST00000556897 CSTAP01040 98 aa7.88□□□□□ -1.15
HNRNPC-227ENST00000556897 LINC00032P0C843 101 aa7.88□□□□□ -1.15
HNRNPC-227ENST00000556897 UBTFL6P0CB48 400 aaPredicted RBP7.88□□□□□ -1.15
HNRNPC-227ENST00000556897 LAMP1P11279 417 aa7.88□□□□□ -1.15
HNRNPC-227ENST00000556897 BCKDHAP12694 445 aa7.88□□□□□ -1.15
HNRNPC-227ENST00000556897 SERPINF1P36955 418 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms