RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 CD274Q9NZQ7 290 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 COX16Q9P0S2 106 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 WRAP73Q9P2S5 460 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-221ENST00000556534 NAP1L2Q9ULW6 460 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-221ENST00000556534 UBQLN1Q9UMX0 589 aaKnown RBP2.94□□□□□ -1.94
SCFD1-221ENST00000556534 NEU3Q9UQ49 428 aa2.94□□□□□ -1.94
SCFD1-221ENST00000556534 MRPS33Q9Y291 106 aaKnown RBP2.94□□□□□ -1.94
SCFD1-221ENST00000556534 OR6C65A6NJZ3 312 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 TMEM110-MUSTN1A8MSY1 372 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 AP3B1O00203 1094 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 BCAS1O75363 584 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-221ENST00000556534 RHOBTB1O94844 696 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 GABRR1P24046 479 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 NTSP30990 170 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 BTDP43251 543 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 PPT1P50897 306 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 UCNP55089 124 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 TNFRSF17Q02223 184 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 NDUFA9Q16795 377 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 ZNF630Q2M218 657 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-221ENST00000556534 CFAP221Q4G0U5 840 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 BOLA3Q53S33 107 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 ACSM5Q6NUN0 579 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 BLOC1S2Q6QNY1 142 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 MKXQ8IYA7 352 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 OR9A1PQ8NGU1 263 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 RAET1EQ8TD07 263 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 SPRYD4Q8WW59 207 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-221ENST00000556534 RLN3Q8WXF3 142 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 DCUN1D4Q92564 292 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 CELF6Q96J87 481 aaKnown RBP2.93□□□□□ -1.94
SCFD1-221ENST00000556534 SLC35E1Q96K37 410 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 CYP2S1Q96SQ9 504 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 GON7Q9BXV9 100 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 GSDMCQ9BYG8 508 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 VCX2Q9H322 139 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 LRRC40Q9H9A6 602 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 ELOVL3Q9HB03 270 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 B3GNT2Q9NY97 397 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 ANGPTL2Q9UKU9 493 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 SMC3Q9UQE7 1217 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 GSTK1Q9Y2Q3 226 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 OR10H1Q9Y4A9 318 aa2.93□□□□□ -1.94
SCFD1-221ENST00000556534 PPIAL4CA0A0B4J2A2 164 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 H3BMQ9 156 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 CLDN5O00501 218 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 STX7O15400 261 aaKnown RBP2.92□□□□□ -1.94
SCFD1-221ENST00000556534 B3GAT3O94766 335 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 SUPT7LO94864 414 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 F10P00742 488 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 IL1BP01584 269 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 TPM2P07951 284 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 PPIAL4GP0DN37 164 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 SERPINA2P20848 420 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 NMT1P30419 496 aaKnown RBP2.92□□□□□ -1.94
SCFD1-221ENST00000556534 MAGEA5P43359 124 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 SULT1E1P49888 294 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 CCDC183Q5T5S1 534 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 TTC23Q5W5X9 447 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 FAM199XQ6PEV8 388 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-221ENST00000556534 DNM1P46Q6ZS02 220 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 DPY19L4Q7Z388 723 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 TMEM17Q86X19 198 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 ZNF433Q8N7K0 673 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-221ENST00000556534 ANKFN1Q8N957 763 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 OR2AP1Q8NGE2 309 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 OR8J1Q8NGP2 316 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 RNF139Q8WU17 664 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 EMG1Q92979 244 aaKnown RBP2.92□□□□□ -1.94
SCFD1-221ENST00000556534 FAM104AQ969W3 186 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 SLC41A3Q96GZ6 507 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 TMEM101Q96IK0 257 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 OR5B2Q96R09 309 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 CCT7Q99832 543 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 TCHPQ9BT92 498 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 RAB18Q9NP72 206 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 ZNF331Q9NQX6 463 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-221ENST00000556534 CLEC4AQ9UMR7 237 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 DDX49Q9Y6V7 483 aaKnown RBP2.92□□□□□ -1.94
SCFD1-221ENST00000556534 SPACA6W5XKT8 324 aa2.92□□□□□ -1.94
SCFD1-221ENST00000556534 A0A0J9YXY3 114 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 PSMB11A5LHX3 300 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 USP27XA6NNY8 438 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 ABCD4O14678 606 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 ZNF264O43296 627 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 ADCY5O95622 1261 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 IGF1P05019 195 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 CAPN1P07384 714 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 PCMT1P22061 227 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 CD80P33681 288 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 AIF1P55008 147 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 MECOMQ03112 1051 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 MAPK6Q16659 721 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 TPD52L1Q16890 204 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-221ENST00000556534 TATDN3Q17R31 274 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 LIPNQ5VXI9 398 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 PMF1Q6P1K2 205 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 FAHD2BQ6P2I3 314 aaPredicted RBP2.91□□□□□ -1.94
SCFD1-221ENST00000556534 Q6P435 159 aa2.91□□□□□ -1.94
SCFD1-221ENST00000556534 ZYG11AQ6WRX3 759 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms